Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq13327 374 1e-98 >seq13327 Length=3816 Score = 374 bits (414), Expect = 1e-98 Identities = 666/968 (69%), Gaps = 4/968 (0%) Strand=Plus/Plus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 ||||| |||| ||||| ||||| || || | |||||||| |||||||| |||| ||| Sbjct 1843 GCTAAATCTAGAGGGAAATTGTGCGCGTTACGCTCATGCATTACTTCCATTCCTAGATTT 1902 Query 7951 GCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGAT 8010 || | ||||| | || | || | | ||| | || | |||||| | |||| Sbjct 1903 GCACGATTTAAGATATCGGCTCAACTCGAAATTACACGTCCTTCTGCATCAATGATTGAT 1962 Query 8011 TGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAAC 8070 ||||| || || ||||| || || || || ||||| || | ||| ||||| | ||||| Sbjct 1963 TGGTTGAAATTGAATCCATTTAGATTGAAAGCCATAGTACTAATTCCCATTGCTGTTAAT 2022 Query 8071 CAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAAAC 8130 || | | || || || | | || ||||||||||| | | | ||| ||||| Sbjct 2023 CAGATTCCAACTACCGGTCAAATTGCAAGGAAGAAGTGTAAAGAACGTGAGTTATTAAAA 2082 Query 8131 GATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTC 8190 ||| | || ||||||| | || |||||||| || || || || |||||||| || Sbjct 2083 CTTGCGAATTGAAAGATTAGACGCCCGAAGTATCCGTGCGCGGCTACGATATTATATGTT 2142 Query 8191 TCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTG 8250 || | ||| || || || ||||| ||||| || | || || |||||| | ||| Sbjct 2143 TCATATTCCTGTCCGAATTTATACCCATAATTAGGTGATTCATCTTCACTAGTCATAGAA 2202 Query 8251 ATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATA 8310 |||| || |||||||||||||| || ||||||||||| || | ||||| || || | Sbjct 2203 ATTAAAGTTGATGTAACTAAAGATCCATGCATAGCACTAAATAAAGATCCTCCAAATACT 2262 Query 8311 CCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACG 8370 ||||| || || ||||| |||||||| ||||| | || ||||||||||| |||||||| Sbjct 2263 CCTGCCACTCCAGCCATGTGGAAAGGGTGCATTAAGATATTATGCTCTGCCTGGAATACT 2322 Query 8371 AACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGA 8430 | ||||||||| || || |||||||| ||||||||||||||||| || || || || || Sbjct 2323 AGCATGAAGTTGAATGTTCCAGAAATTCCTAGAGGCATTCCATCTGAAAAAGATCCTTGT 2382 Query 8431 CCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTACA 8490 || | ||| || |||| || || || | || || | ||||| ||| | ||||| Sbjct 2383 CCGATTGGGTAAACTAGAAATACAGCCGATGCTGCTGCAACTGGTGCAGAGAAAGCTACG 2442 Query 8491 CAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAGCA 8550 | || || || | ||| ||||| ||||| ||| || |||| | ||| | || | Sbjct 2443 AAAATTCAAGGACGCATTCCTAAACGGTAACTTAATTCTCACTCACGACCAAGATATGAT 2502 Query 8551 GAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACCAC 8610 | | || || | ||| || | | ||| || || || || |||||||||||||| || Sbjct 2503 GCTACCCCGATTAAGAAATGTAGTACAACGAATTGGTAAGGTCCTCCGTTATACAATCAT 2562 Query 8611 TCATCTAATGTGGCA--GCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAG 8668 || || ||| || || || || | | ||| || || | |||||||| || ||| Sbjct 2563 TCCTC-AAT-ACACATCGCATCTCACACCGTATACAAATGCATACCAATAGCATTTGAAC 2620 Query 8669 ATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTT 8728 || || || || || ||||| || || ||||| || | | || |||| ||| || | Sbjct 2621 TCGGTACTACGGCTCCTGAGATAATATTATTTCCGTATAGAAGAGAGCCTGAAACTGGCT 2680 Query 8729 CACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAG 8788 ||||||| || || ||||| || || || || || | ||| || | || || || | Sbjct 2681 CACGAATTCCATCAATATCTACTGGCGGTGCGGCTACAAAAGCAGCAATGAAACACGATA 2740 Query 8789 CAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGT 8848 | || ||| || || | ||||| | ||||||||| |||| ||| || | | || Sbjct 2741 CTGCTAATAATAACGTTGGCACCATTAATAATCCAAACCATCCGATATATAGACGGCGGT 2800 Query 8849 TTGTACTT 8856 |||| || Sbjct 2801 CTGTATTT 2808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614733139306800