Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_020866.1 Length=40231 Score E Sequences producing significant alignments: (Bits) Value seq80342 152 1e-32 >seq80342 Length=3778 Score = 152 bits (168), Expect = 1e-32 Identities = 138/170 (81%), Gaps = 3/170 (2%) Strand=Plus/Minus Query 39908 AGCTGGAGTTTTCCGCTAAGTTT-CCCTGGCTGGGAGA-GGAGCGGAATCGCATGAAGGC 39965 |||| ||||||||||| |||| ||| |||||| ||| |||||||| | ||||| || Sbjct 2570 AGCTAGAGTTTTCCGCGCTGTTTTCCCAGGCTGG-AGATGGAGCGGAGACCGATGAAAGC 2512 Query 39966 ATCGAAGTTCACAGAGGCGCAGAAGGCGTTCATCCTGAAGCAGGGCGAGGAAGGCACGCC 40025 |||||||||||| || ||||||||| |||||||| | || || |||||||| |||||||| Sbjct 2511 ATCGAAGTTCACGGACGCGCAGAAGACGTTCATCATTAACCAAGGCGAGGATGGCACGCC 2452 Query 40026 GGTCGCAAAGATCTGCCGCAAGGCCGGGATCAGCTAGGCGGCCTACTTCA 40075 || || ||| |||||| ||||| || || ||| ||||| ||||||||| Sbjct 2451 TGTGGCGCAGACCTGCCGGAAGGCGGGAATTAGCCAGGCGACCTACTTCA 2402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128393555375540