Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq13327 419 7e-113 >seq13327 Length=3816 Score = 419 bits (464), Expect = 7e-113 Identities = 671/958 (70%), Gaps = 8/958 (1%) Strand=Plus/Plus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 ||||| || || || || || || || |||||||| ||||| ||||| | || || || Sbjct 1843 GCTAAATCTAGAGGGAAATTGTGCGCGTTACGCTCATGCATTACTTCCATTCCTAGATTT 1902 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996 || || ||||| | ||| || || | | |||| ||| | |||| | | ||| Sbjct 1903 GCACGATTTAAGATATCGGCTCAACTCGAAATTACACGTCCTTCTGCATCAATGATTGAT 1962 Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056 ||||| || || || |||||||| || || ||||| || | || ||||| | ||| | Sbjct 1963 TGGTTGAAATTGAATCCATTTAGATTGAAAGCCATAGTACTAATTCCCATTGCTGTTAAT 2022 Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116 || || ||||| ||||| ||| | ||||| ||||| || | |||||| |||||||||| Sbjct 2023 CAGATTCCAACTACCGGTCAAATTGCAAGGAAGAAGTGTAAAGAACGTGAGTTATTAAAA 2082 Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTC 26176 || || | ||||| |||| | ||| ||||| ||||| || || || ||||||||||| Sbjct 2083 CTTGCGAATTGAAAGATTAGACGCCCGAAGTATCCGTGCGCGGCTACGATATTATATGTT 2142 Query 26177 TCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCA 26236 || | || || || || ||||| |||||||| |||| | || || | || | | Sbjct 2143 TCATATTCCTGTCCGAATTTATACCCATAATTAGGTGATTCATCTTCACTAGTCATAGAA 2202 Query 26237 ATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAACC 26296 || | | || ||||| ||| ||| ||||||||| || | || ||| || || || Sbjct 2203 ATTAAAGTTGATGTAACTAAAGATCCATGCATAGCACTAAATAAAGATCCTCCAAATACT 2262 Query 26297 CCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAATACG 26356 || || || |||||||| ||||| |||||||| | |||||||| ||||| |||||||| Sbjct 2263 CCTGCCACTCCAGCCATGTGGAAAGGGTGCATTAAGATATTATGCTCTGCCTGGAATACT 2322 Query 26357 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTGT 26416 | ||| ||||| || || ||||| || || |||||||||||||| |||| |||||| Sbjct 2323 AGCATGAAGTTGAATGTTCCAGAAATTCCTAGAGGCATTCCATCTGAAAAAGATCCTTGT 2382 Query 26417 CCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACA 26476 |||| || ||||||| || || || ||||| | | |||||| | | || || Sbjct 2383 CCGATTGGGTAAACTAGAAATACAGCCGATGCTGCTGCAACTGGTGCAGAGAAAGCTACG 2442 Query 26477 AATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATATGCT 26536 || || || || | |||||||| | |||| || ||| |||| | || ||||| | Sbjct 2443 AAAATTCAAGGACGCATTCCTAAACGGTAACTTAATTCTCACTCACGACCAAGATATGAT 2502 Query 26537 GCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCAC 26596 ||||| || |||||||| || | | || || ||| || ||||| || || || | || Sbjct 2503 GCTACCCCGATTAAGAAATGTAGTACAACGAATTGGTAAGGTCCTCCGTTATACAATCAT 2562 Query 26597 TCGTCCAGTGTGC-CA--GCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAG 26653 || || | | | || || || || | || || ||||| | || || || || || Sbjct 2563 TCCTCAA---TACACATCGCATCTCACACCGTATACAAATGCATACCAATAGCATTTGAA 2619 Query 26654 GAGGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGC 26713 || || || |||||||| || ||||| |||||||| | | ||||| ||||||||| Sbjct 2620 CTCGGTACTACGGCTCCTGAGATAATATTATTTCCGTATAGAAGAGAGCCTGAAACTGGC 2679 Query 26714 TCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAAACATG-T 26772 ||||| || ||||| |||||||| |||||||| || | || ||| || ||||| | | Sbjct 2680 TCACGAATTCCATCAATATCTACTGGCGGTGCGGCTACAAAAGCAGCAATGAAACACGAT 2739 Query 26773 AGTGGCTGCGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGG 26830 | | ||| | ||| || | ||| | | || |||||||| | ||| |||||| Sbjct 2740 ACT-GCTAATAATAACGTTGGCACCATTAATAATCCAAACCATCCGATATATAGACGG 2796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147454694004800