Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq13327 421 2e-113 >seq13327 Length=3816 Score = 421 bits (466), Expect = 2e-113 Identities = 674/964 (70%), Gaps = 4/964 (0%) Strand=Plus/Plus Query 40533 GCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACTC 40592 ||||| |||||||| || ||||| ||||||||||| |||||||||||||| |||||| | Sbjct 1843 GCTAAATCTAGAGGGAAATTGTGCGCGTTACGCTCATGCATTACTTCCATTCCTAGATT- 1901 Query 40593 TGTCTG--TTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTG 40650 || | |||||| ||| || ||| | | ||| || || | || || | | || Sbjct 1902 TGCACGATTTAAGAT-ATCGGCTCAACTCGAAATTACACGTCCTTCTGCATCAATGATTG 1960 Query 40651 ACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGTAA 40710 | ||||| || || || ||||| || || |||||||||||| || ||||| | || | Sbjct 1961 ATTGGTTGAAATTGAATCCATTTAGATTGAAAGCCATAGTACTAATTCCCATTGCTGTTA 2020 Query 40711 GCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGA 40770 || || |||| ||||| || |||| |||||||||| | ||| || || | Sbjct 2021 ATCAGATTCCAACTACCGGTCAAATTGCAAGGAAGAAGTGTAAAGAACGTGAGTTATTAA 2080 Query 40771 ATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAAG 40830 | || ||||||| ||||| | || ||||| ||||| || |||||||| ||||| | Sbjct 2081 AACTTGCGAATTGAAAGATTAGACGCCCGAAGTATCCGTGCGCGGCTACGATATTATATG 2140 Query 40831 TCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCCC 40890 | || |||||| || || |||||||| || || |||||||| ||| | ||| Sbjct 2141 TTTCATATTCCTGTCCGAATTTATACCCATAATTAGGTGATTCATCTTCACTAGTCATAG 2200 Query 40891 GAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAAGA 40950 ||| | | || ||||| | ||| ||||||||| ||| |||| || ||||| | Sbjct 2201 AAATTAAAGTTGATGTAACTAAAGATCCATGCATAGCACTAAATAAAGATCCTCCAAATA 2260 Query 40951 CGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGA 41010 | ||||| || || ||| ||||| |||||||| | || || || ||||| ||||| | Sbjct 2261 CTCCTGCCACTCCAGCCATGTGGAAAGGGTGCATTAAGATATTATGCTCTGCCTGGAATA 2320 Query 41011 CAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACCCT 41070 | | ||||||||||||||||||| ||||||| |||||| ||||| || ||||| || | Sbjct 2321 CTAGCATGAAGTTGAATGTTCCAGAAATTCCTAGAGGCATTCCATCTGAAAAAGATCCTT 2380 Query 41071 GACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGCCA 41130 | |||| ||| ||||||| |||||||| ||||||| | ||| || | | | || | Sbjct 2381 GTCCGATTGGGTAAACTAGAAATACAGCCGATGCTGCTGCAACTGGTGCAGAGAAAGCTA 2440 Query 41131 CAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTATG 41190 | || || || || | ||| |||| | ||| | ||| |||| | |||| |||| Sbjct 2441 CGAAAATTCAAGGACGCATTCCTAAACGGTAACTTAATTCTCACTCACGACCAAGATATG 2500 Query 41191 CTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCC 41250 |||||| || ||||| || || | |||| || ||| || ||||| ||||| || | | Sbjct 2501 ATGCTACCCCGATTAAGAAATGTAGTACAACGAATTGGTAAGGTCCTCCGTTATACAATC 2560 Query 41251 ACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGC 41310 | || || | || || || | | || ||||| | || || || || || | Sbjct 2561 ATTCCTCAATACACATCGCATCTCACACCGTATACAAATGCATACCAATAGCATTTGAAC 2620 Query 41311 TCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCT 41370 |||| || || ||||| || |||||||| || ||||| | | ||||| ||||| |||| Sbjct 2621 TCGGTACTACGGCTCCTGAGATAATATTATTTCCGTATAGAAGAGAGCCTGAAACTGGCT 2680 Query 41371 CACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAAACATGTGG 41430 |||| || ||||| |||||||| |||||||| || | ||| || |||||||| | Sbjct 2681 CACGAATTCCATCAATATCTACTGGCGGTGCGGCTACAAAAGCAGCAATGAAACACGATA 2740 Query 41431 TAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGT 41490 || || ||| | ||| | ||||| | |||||||| || | ||||| ||| || Sbjct 2741 CTGCTAATAATAACGTTGGCACCATTAATAATCCAAACCATCCGATATATAGACGGCGGT 2800 Query 41491 CGGT 41494 | || Sbjct 2801 CTGT 2804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143452078502460