Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq13327 455 4e-123 >seq13327 Length=3816 Score = 455 bits (504), Expect = 4e-123 Identities = 639/897 (71%), Gaps = 0/897 (0%) Strand=Plus/Plus Query 67368 TCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTCCTGCTCTG 67427 || |||||||| ||||| ||||||||||| ||||| ||||||||||| || ||| | Sbjct 1849 TCTAGAGGGAAATTGTGCGCGTTACGCTCATGCATTACTTCCATTCCTAGATTTGCACGA 1908 Query 67428 TTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGACGGATTGGTTG 67487 || | ||| || || ||| | | ||| || || |||| |||| || ||||||||| Sbjct 1909 TTTAAGATATCGGCTCAACTCGAAATTACACGTCCTTCTGCATCAATGATTGATTGGTTG 1968 Query 67488 AAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGTGAACCAGATG 67547 || ||||| || || || ||||| |||||||| | |||||||| || || ||||| Sbjct 1969 AAATTGAATCCATTTAGATTGAAAGCCATAGTACTAATTCCCATTGCTGTTAATCAGATT 2028 Query 67548 CAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAAGATGCA 67607 | || || || | |||||||||||||| | | | |||||| || ||| ||| Sbjct 2029 CCAACTACCGGTCAAATTGCAAGGAAGAAGTGTAAAGAACGTGAGTTATTAAAACTTGCG 2088 Query 67608 TACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTAAGTCTCTTCT 67667 | || ||||| | || ||||||||||| || || || || || || || || || | | Sbjct 2089 AATTGAAAGATTAGACGCCCGAAGTATCCGTGCGCGGCTACGATATTATATGTTTCATAT 2148 Query 67668 TCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTGATAAGA 67727 || |||||||| || || || || || |||| || | ||| |||| || | | Sbjct 2149 TCCTGTCCGAATTTATACCCATAATTAGGTGATTCATCTTCACTAGTCATAGAAATTAAA 2208 Query 67728 GAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACACCTGCT 67787 | || ||||| | ||| || |||||||||||||| | || || || ||||| ||||| Sbjct 2209 GTTGATGTAACTAAAGATCCATGCATAGCACTAAATAAAGATCCTCCAAATACTCCTGCC 2268 Query 67788 ACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACATG 67847 |||||| ||| ||||| |||||||| | ||| || |||||||| ||||| || | |||| Sbjct 2269 ACTCCAGCCATGTGGAAAGGGTGCATTAAGATATTATGCTCTGCCTGGAATACTAGCATG 2328 Query 67848 TAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCTTGACCGAAA 67907 |||| || || |||||||| || ||||||||| | || || ||||| ||||| |||| Sbjct 2329 AAGTTGAATGTTCCAGAAATTCCTAGAGGCATTCCATCTGAAAAAGATCCTTGTCCGATT 2388 Query 67908 GGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTATGCTACACAGATC 67967 || || || | || ||||| ||||||| | ||||| |||||| | ||||| | || Sbjct 2389 GGGTAAACTAGAAATACAGCCGATGCTGCTGCAACTGGTGCAGAGAAAGCTACGAAAATT 2448 Query 67968 CAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACAGTATGCTGTGATT 68027 ||||||||||| || | ||||||| | ||| |||| ||||||| |||| || | Sbjct 2449 CAAGGACGCATTCCTAAACGGTAACTTAATTCTCACTCACGACCAAGATATGATGCTACC 2508 Query 68028 CCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATACAACCACTCATCT 68087 ||||| | ||| || | || || | |||| ||||||| || |||||||| || || || Sbjct 2509 CCGATTAAGAAATGTAGTACAACGAATTGGTAAGGTCCTCCGTTATACAATCATTCCTCA 2568 Query 68088 AGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTTGAACTAGGAACA 68147 | | || || || | | ||| || || | ||| || || |||||||| || || Sbjct 2569 ATACACATCGCATCTCACACCGTATACAAATGCATACCAATAGCATTTGAACTCGGTACT 2628 Query 68148 ACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACAGGTTCTCTGATA 68207 || || || || || || || || ||||| | || || |||| ||| || || | || Sbjct 2629 ACGGCTCCTGAGATAATATTATTTCCGTATAGAAGAGAGCCTGAAACTGGCTCACGAATT 2688 Query 68208 CCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCAAGTTGCTGCT 68264 ||||| ||||| ||||| ||||| || | || ||| ||||| || | | ||||| Sbjct 2689 CCATCAATATCTACTGGCGGTGCGGCTACAAAAGCAGCAATGAAACACGATACTGCT 2745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565907631440400