Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq13327 430 1e-115 seq303 405 6e-108 >seq13327 Length=3816 Score = 430 bits (476), Expect = 1e-115 Identities = 630/889 (71%), Gaps = 4/889 (0%) Strand=Plus/Plus Query 67849 TCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAACCAGCGCGG 67908 || |||||||| ||||| ||||||||||||||||| |||||||| || | | || || Sbjct 1849 TCTAGAGGGAAATTGTGCGCGTTACGCTCATGCATTACTTCCATTCCTAGATTTGCACGA 1908 Query 67909 TTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGATAGACTGGTTG 67968 || | | || || || | | | || || ||||| ||| || |||||| Sbjct 1909 TTTAAGATATCGGCTCAACTCGAAATTACACGTCCTTCTGCATCAATGATTGATTGGTTG 1968 Query 67969 AAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGAACCAGATA 68028 || ||||| ||||| || ||||| ||||| || |||| || | ||| || || ||||| Sbjct 1969 AAATTGAATCCATTTAGATTGAAAGCCATAGTACTAATTCCCATTGCTGTTAATCAGATT 2028 Query 68029 CCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGATGCA 68088 ||||| || || || |||||||||||||| | ||||| ||||| || || ||| Sbjct 2029 CCAACTACCGGTCAAATTGCAAGGAAGAAGTGTAAAGAACGTGAGTTATTAAAACTTGCG 2088 Query 68089 TACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTCTCTTCT 68148 | || ||||| ||||| ||||||||||| || || || || || || || || || | | Sbjct 2089 AATTGAAAGATTAGACGCCCGAAGTATCCGTGCGCGGCTACGATATTATATGTTTCATAT 2148 Query 68149 TCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCACGAACCAGT 68208 || || ||||| || || ||||| || | || ||| |||| | || | || | Sbjct 2149 TCCTGTCCGAATTTATACCCATAATTAGGTGATTCATCTTCACTAGTCATAGAAATTAAA 2208 Query 68209 GAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAATACGCCAGCA 68268 | || ||||| | || |||||||| ||||| || | |||||| |||||||| || || Sbjct 2209 GTTGATGTAACTAAAGATCCATGCATAGCACTAAATAAAGATCCTCCAAATACTCCTGCC 2268 Query 68269 ACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAACACCAGCATG 68328 || || ||| ||||| |||||||| | ||| || |||||||| ||||| || |||||| Sbjct 2269 ACTCCAGCCATGTGGAAAGGGTGCATTAAGATATTATGCTCTGCCTGGAATACTAGCATG 2328 Query 68329 TAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCTTGACCGAAA 68388 ||||||| || |||||||| || ||||||||| | || || || || ||||| |||| Sbjct 2329 AAGTTGAATGTTCCAGAAATTCCTAGAGGCATTCCATCTGAAAAAGATCCTTGTCCGATT 2388 Query 68389 GGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCAACACAGATC 68448 || || || || || || || |||||||||||||| ||||||||| | || || | || Sbjct 2389 GGGTAAACTAGAAATACAGCCGATGCTGCTGCAACTGGTGCAGAGAAAGCTACGAAAATT 2448 Query 68449 CAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTATGCAAAGATA 68508 ||||||||||| || | ||| || | ||| || ||||| || | |||| | | || Sbjct 2449 CAAGGACGCATTCCTAAACGGTAACTTAATTCTCACTCACGACCAAGATATG--ATGCTA 2506 Query 68509 --CCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTACAACCACTCAT 68566 || || | ||| || | | |||| |||| |||| || || || ||||| || || | Sbjct 2507 CCCCGATTAAGAAATGTAGTACAACGAATTGGTAAGGTCCTCCGTTATACAATCATTCCT 2566 Query 68567 CAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGAACTAGGAA 68626 ||| || || || | | ||| || || | |||||| ||||||||||| || | Sbjct 2567 CAATACACATCGCATCTCACACCGTATACAAATGCATACCAATAGCATTTGAACTCGGTA 2626 Query 68627 CAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGGTTCACGAA 68686 | || || || || || || || || || || ||||| || || | ||| || ||||||| Sbjct 2627 CTACGGCTCCTGAGATAATATTATTTCCGTATAGAAGAGAGCCTGAAACTGGCTCACGAA 2686 Query 68687 TACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAAACA 68735 | ||||| || || || || || || || | || || | |||||||| Sbjct 2687 TTCCATCAATATCTACTGGCGGTGCGGCTACAAAAGCAGCAATGAAACA 2735 >seq303 Length=42796 Score = 405 bits (448), Expect = 6e-108 Identities = 685/988 (69%), Gaps = 8/988 (1%) Strand=Plus/Plus Query 66584 TTATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGG 66643 || ||| || ||||| || || || | |||||| |||||||| | || |||||||| || Sbjct 26691 TTGTTAGAGAGCATTTCCGCGAGGTAAAACTTCCTCTGGGAAAATGAAATTTTCATGAGG 26750 Query 66644 TTGATCG---ATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGT 66700 ||| || |||| ||| || ||||| | |||||||| | | || || || || Sbjct 26751 TTGGTCCTGCATAG---CCATTCAAGCACGGATTCCTTCATTAAGCAATATATTTTTGGT 26807 Query 66701 GTAGAACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATA 66760 || ||||| ||||| || || ||||| ||||||| | |||||| || ||||| || || Sbjct 26808 ATAAAACGTTTCGAATTCAGGATCTTCGGCTGCTCGTAACTCTTGAGACACAAAATCGTA 26867 Query 66761 AGCACGAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAAC 66820 || | | || | || ||||||| || || | | | || || | || | || Sbjct 26868 TGCCCTTAAATTTAAGGCCAGACCAACCATCCCAAAAGCAGAAGTTCATAAGCCAGTTAC 26927 Query 66821 AGGAACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGAT 66880 || || || |||||||||||||| ||||| | ||| || ||| || | ||||| || Sbjct 26928 CGGTACGAATAACATAAAGAAATGTAACCAACGCTTGTTAGAAAAAGCTACTCCAAAAAT 26987 Query 66881 CTGAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTC 66940 |||||| || || || ||||| || |||||||| ||||| ||||| ||| || | | Sbjct 26988 CTGAGATCAAAAACGATTTGCGGTTACCATTGAATAAGTCTCTTCTAATTGCGTTGGGCT 27047 Query 66941 GAATGCTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAAC 67000 || || || |||| ||||||||| ||| | ||||| | ||| || | Sbjct 27048 AAAAGCACGAAAGGTGTCATACGACACACCATCTTTATATAAGGTATTTTGTACAGTCGC 27107 Query 67001 ACCATGAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAA 67060 ||||| |||||||| | || ||||| || | |||||||| |||||||||||||| || Sbjct 27108 TCCATGGATGGCAGACAATAACGCACCTCCTAAAATACCTGCGACACCCATCATATGGAA 27167 Query 67061 CGGGTTCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGA 67120 || |||| || |||||||| || ||||| | ||| || | |||| ||| || || | Sbjct 27168 AGGATTCAGTGTTCAGTTATGAAACCCTTGAAAGAATAGTAAAAATCTAAAAATGGCAGC 27227 Query 67121 GACCCCGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGAC 67180 || || ||| ||| || ||||| ||||||| |||||| | ||| || || | |||||| Sbjct 27228 CACTCCAAAACTTGGTGCAAAAAATCAACTCGCTTGACCTAAAGGATAAATTAAAAAGAC 27287 Query 67181 ACTAACAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGAT 67240 | |||||||| || || ||||| | ||| ||||| ||||| || ||||| | | Sbjct 27288 AGATACAAAAACTGCAATTGGACCGGTGAAAGCAATTGCATTATATGGACGAACCTGCAC 27347 Query 67241 GAGACGTGCCAGTTCAAACTGGC-GAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGA 67299 | | ||| | |||||| || | || || || || | | || | ||| || | Sbjct 27348 TAACCTTGCAATTTCAAATTGTCTTAAACA-AAATCCTGCCAACCCTAAGGTCCCATGAA 27406 Query 67300 GCGCCACAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACT 67359 || | |||||| || | ||||||| ||| ||| || ||| ||||||| | Sbjct 27407 AGGCGATAAAATTTCATAAACCTCCAACTTGATACCATCGAGTTAAAAGTCCCTGAGCTT 27466 Query 67360 CAGGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCATCAGCAGGCGTTGACACAGCCG 67419 | ||||| ||| ||| | ||| || || ||||| || ||| ||||| || ||||| | Sbjct 27467 CGGGACCTCAAGGTAATAAAAGCGAGTGCCCCATGCAATTAGCCGGCGTGGATACAGCAG 27526 Query 67420 CTGTGAGAAAATTAGCACCCTCAAGATAACTAGACGCGAGTCCGTGAGTGTACCAGCTTG 67479 | || | ||||||| ||| || ||||| ||||| || || || |||| ||||| |||| Sbjct 27527 CAGTTAAAAAATTACAACCTTCTAGATAGCTAGATGCTAGACCATGAGAATACCAACTTG 27586 Query 67480 TGACAAACGTAGTACCAGTAAGCCAGCCACCAATTGCCATATAAGCAGTGGGAAAAAGAA 67539 | || || |||||||| || || || || | |||| |||||| || |||||||| | Sbjct 27587 TTACGAAAGTAGTACCCACAAATCATCCTCCGACCGCCAAATAAGCGGTCGGAAAAAGCA 27646 Query 67540 GTAGTCCAGACCAACCCACAAAGACAAA 67567 || ||| || || || ||||| | ||| Sbjct 27647 ATAATCCGGATCAGCCAACAAATATAAA 27674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571005466750800