Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq10895 165 2e-35 seq791 93.3 1e-13 seq2011 89.7 2e-12 >seq10895 Length=16309 Score = 165 bits (182), Expect = 2e-35 Identities = 517/798 (65%), Gaps = 17/798 (2%) Strand=Plus/Minus Query 155568 TTTACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCG 155627 || |||||||| |||| | ||||| |||| ||||| ||||| || | | | | Sbjct 11369 TTAACAAACATGGGAAGAGCTATAGAGGCCAAGTTACAAACCGCTACTTCATCGGGGGAG 11310 Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 | ||||| | ||||| || || || ||| ||| || || || |||||||| Sbjct 11309 GTATATTCCAATATCTCGGTACAAAGATTGGAAGATCGGATAGTACCCAAGTTCTTCTGA 11250 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747 || ||||| || |||||||| || || || || || ||||| ||||| ||||| Sbjct 11249 TTGCTTTTACGATTGGCCGCATCCTTATAAAGCATATAGGGCGTTCCCGTCTCAATCTGG 11190 Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAA----TTTGCTTGTTGTATCTGCC 155803 | |||| || ||| ||| | || | ||| || | ||||| |||| Sbjct 11189 GATTCCAATATTTTTTCCCATAAATCCCTGGCCTTTACCGTTTTGCGACCCTTATCC--- 11133 Query 155804 TTCCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCC 155863 || | ||||||||||| ||| || || | ||||||| || | | || ||| Sbjct 11132 -TCTGCCTCATATTTCAAATATAGTTTTTCAAATTCCTCACTGTGATTTGAAAACAATCC 11074 Query 155864 AGGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAA 155923 || || | || |||||| | | | |||| || ||| | || |||| ||| || Sbjct 11073 TGGACATTCATTGGGGCACATTAAGGTCCAATCTTCATTGGCCTCCACGCGCTTCATGAA 11014 Query 155924 TACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGC---CTTTGACTCCTCATCGCC 155980 | ||| ||| || || ||||| || || | || | || || || | || Sbjct 11013 CAAATCTGGAATCCACATGGCGTAGAACAGATCACGGGCACGCATT---TCTTCCTTTCC 10957 Query 155981 GTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACAT 156040 ||| |||||| | || || || || |||||| | ||| ||||| | ||| || Sbjct 10956 GTGGTTCTTCTTCAATTCCAAAAAGTCAAAAATATCCGCATGCCAAGGCTCTACATAAAT 10897 Query 156041 AGCAAAACTACCATTCCTCTT---GCCACCCTGATCTACATACCGAGCAGTCTTATTGAA 156097 |||||||| || || | ||| ||| || ||||| || || || || || | ||| || Sbjct 10896 GGCAAAACTTCCTTTTCGCTTCCCGCCTCCTTGATCAACGTAGCGTGCCGTGTCATTAAA 10837 Query 156098 GACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACC 156157 || | ||||||||| | ||||||||||||||| |||||||| ||| |||| || || Sbjct 10836 TACCCTTAGCATAGGGACAATACCATTGGAAGTACCATTGGTACCGGCTATATATGATCC 10777 Query 156158 AGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGC 156217 | | |||||||| ||||| ||||| || || || | ||| || |||| || Sbjct 10776 CGTAGCCCGAACATTGTGAATGGAAAGTCCGATTCCCCCCGCAGATTGGGAGATTTTCGC 10717 Query 156218 GCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATA 156277 | | ||| | || | | ||||||| || ||| || || | ||| | | ||| | Sbjct 10716 GGTCTGCTTCAAGGTGTCGTAAATACCATCGATACTGTCGTCCTTCATGGCCAATAGGAA 10657 Query 156278 GCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAAT 156337 ||| || | || || || ||||| | |||||| || |||||||||||||| | Sbjct 10656 GCAGGAGGACATCTGCGGCTTGGGCGTTCCGGAGTTGAAGAGGGTAGGTGTTGCATGGGT 10597 Query 156338 AAAATACTTATTAGACAT 156355 ||||| || || ||||| Sbjct 10596 GAAATATTTTTTTGACAT 10579 >seq791 Length=4806 Score = 93.3 bits (102), Expect = 1e-13 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 409105 GCCTCCATAGCTCAGTTGGTCAGAGCGTGCGGCTGTTAACCGCGAGGTCACCGGTTCGAA 409164 |||| | ||||||||||||| |||||||||||||||||||||| |||||| |||||||| Sbjct 1811 GCCTTCGTAGCTCAGTTGGTTAGAGCGTGCGGCTGTTAACCGCAAGGTCATCGGTTCGAT 1870 Query 409165 ACCGGTTGGAGGCGttttttt 409185 ||| | | |||||||| || Sbjct 1871 CCCGATCGAGGGCGTTTTCTT 1891 Score = 87.8 bits (96), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 409296 GCCTCCATAGCTCAGTTGGTCAGAGCGTGCGGCTGTTAACCGCGAGGTCACCGGTTCGAA 409355 |||| | ||||||||||||| |||||||||||||||||||||| |||||| |||||||| Sbjct 1811 GCCTTCGTAGCTCAGTTGGTTAGAGCGTGCGGCTGTTAACCGCAAGGTCATCGGTTCGAT 1870 Query 409356 ACCGGTTGGAGGCGTT 409371 ||| | | |||||| Sbjct 1871 CCCGATCGAGGGCGTT 1886 >seq2011 Length=3869 Score = 89.7 bits (98), Expect = 2e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 410494 TGACGCAATGGATAGCGTGCCAGACTTCTAATCTGGAAGTTGCGGGTTCGAGTCCCG 410550 || |||||||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct 2069 TGGCGCAATGGATAGCGCGCCAGACTTCTAATCTGGAGGTTGCGGGTTCGAGTCCCG 2125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1469051369414530