Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq13327 417 9e-112 seq303 392 4e-104 seq11659 87.8 2e-12 >seq13327 Length=3816 Score = 417 bits (462), Expect = 9e-112 Identities = 667/951 (70%), Gaps = 6/951 (1%) Strand=Plus/Minus Query 157609 CCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCAT 157668 ||| || ||| |||| ||||| || || | ||| | ||||| | || |||| || Sbjct 2796 CCGTCTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGCAGT-AT 2738 Query 157669 C-TGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAAC 157727 | |||||||| | || || || || || || || || || || || || || ||||| | Sbjct 2737 CGTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGC 2678 Query 157728 CCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTT 157787 | || | || || || | || || || || || ||||| || || || ||||| || Sbjct 2677 CAGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTT 2618 Query 157788 CCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGC 157847 | || || |||||| | || || ||| | | || || || | |||| || || Sbjct 2617 CAAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGAT 2558 Query 157848 TGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTCATTGG--TATCTATGC 157905 |||||||||| || |||| |||| |||| ||| | || ||| | || || || | || | Sbjct 2557 TGTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGC-AT-C 2500 Query 157906 ATACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGT 157965 ||| | || |||||||| ||| | ||||||||||| ||||| || || || | || Sbjct 2499 ATATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGT 2440 Query 157966 AGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCA 158025 ||| | ||||| ||||| || |||||||| |||||||| || || || || |||| || Sbjct 2439 AGCTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACA 2380 Query 158026 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 158085 ||| ||||| || |||| |||||||| || || ||||| || || |||| |||||| || Sbjct 2379 AGGATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGT 2320 Query 158086 ATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGT 158145 |||||| ||||| || || ||| | |||||||| ||||| ||| || || || || || Sbjct 2319 ATTCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGT 2260 Query 158146 ATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTCG 158205 ||| || |||||| | || ||||||||| ||| | | ||||| || | | || Sbjct 2259 ATTTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTC 2200 Query 158206 TGAAACGACTGAAACAGAGTCACAGAACTACGGTTACAAGTTCGGTCAAGAGGAAGAGAC 158265 | || | |||| || |||| || || || || || ||||| || || | || || Sbjct 2199 TATGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAAC 2140 Query 158266 CTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATT 158325 ||||| ||||| || || || || |||||||| ||| | ||||| |||| ||| || Sbjct 2139 ATATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTT 2080 Query 158326 CAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTT 158385 || ||||| ||||| || |||||||||||||| || || || || || ||||| || Sbjct 2079 TAATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATT 2020 Query 158386 CACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTC 158445 || || | || | || ||||| ||||| || || || ||||| |||||||| || Sbjct 2019 AACAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATC 1960 Query 158446 CATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGCGCTGG 158505 ||| |||||| | || ||||| | | || || ||| | | || || || Sbjct 1959 AATCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAA 1900 Query 158506 TCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGA 158556 ||| || |||||||| ||||||||||||||||| ||||| ||||| || || Sbjct 1899 TCTAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGA 1849 >seq303 Length=42796 Score = 392 bits (434), Expect = 4e-104 Identities = 680/986 (69%), Gaps = 2/986 (0%) Strand=Plus/Minus Query 159330 TTTGTTTTTGTGGGGTGGTCTGGACTACTACTTCTTCCCACTGCTTATCTGGCCATTGGC 159389 ||| | ||||| || || || ||| || | ||| |||| || |||||| |||| | || Sbjct 27674 TTTATATTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGA 27615 Query 159390 GGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGGTACACCCACGGTCTTGCTAGTTCC 159449 || || || || || |||| || || |||||||| | || ||||| || | | Sbjct 27614 GGATGATTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGC 27555 Query 159450 TATCTTGAGGGTGCTAACTTTCTCACAGCAGCTGTCTCGACGCCTGCTGACGCTATGGGT 159509 ||||| || ||| ||| ||| | || || ||||| || ||||| ||| | ||||| Sbjct 27554 TATCTAGAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGG 27495 Query 159510 CATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAA 159569 || || ||| | ||| ||| ||||| || ||||||| ||| || |||| ||| Sbjct 27494 CACTCGCTTTTATTACCTTGAGGTCCCGAAGCTCAGGGACTTTTAACTCGATGGTATCAA 27435 Query 159570 CTTGGGGGATTATGGAATTTTGTGGCACTCCACGGTGCCTTCGCCCTAATTGGTTTCATG 159629 |||| || ||||| |||||| | || | || || |||| | | || || Sbjct 27434 GTTGGAGGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTTTGT 27375 Query 159630 CTCCGTCAGTTTGAACTGGCACGTCTCATTGGTATCCGTCCTTACAATGCTATTGCGTTC 159689 | | || |||||| | ||| | | | | ||||| || ||||| ||||| ||| Sbjct 27374 TTAAGACAATTTGAAATTGCAAGGTTAGTGCAGGTTCGTCCATATAATGCAATTGCTTTC 27315 Query 159690 TCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTCATCTACCCATTGGGTCAGTCCAGT 159749 | ||||| ||||| |||||||| ||||| | || || || || ||||| | ||| Sbjct 27314 ACCGGTCCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGAGT 27255 Query 159750 TGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAA 159809 || ||||| || || ||||| ||||| || || |||||||| | | ||| ||||| Sbjct 27254 TGATTTTTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTTCAA 27195 Query 159810 GGATTTCACAACTGGACGTTAAATCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGT 159869 || ||||| ||||| || | ||||| |||||||||||||| || || ||||| |||| Sbjct 27194 GGGTTTCATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTAGGA 27135 Query 159870 GGAGCACTACTCAGTGCCATCCATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGA 159929 || || || | |||||||||||| | |||||| | || || | ||| ||||||| Sbjct 27134 GGTGCGTTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAAGATGGT 27075 Query 159930 GAACAAGCAAATACCTTTAAGGCGTTTGATTCAACTCAAGAGGAGGAGACTTACTCTATG 159989 | | |||||| || ||| |||| ||| || |||||||| || ||| Sbjct 27074 GTGTCGTATGACACCTTTCGTGCTTTTAGCCCAACGCAATTAGAAGAGACTTATTCAATG 27015 Query 159990 GTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGG 160049 || || ||||| || || || || ||||| || || | || |||||||||||||| ||| Sbjct 27014 GTAACCGCAAATCGTTTTTGATCTCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGTTGG 26955 Query 160050 CTTCATTTCTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCTCTATTGGCATT 160109 | |||||||| ||||| || || || || | || | || || || || |||| || Sbjct 26954 TTACATTTCTTTATGTTATTCGTACCGGTAACTGGCTTATGAACTTCTGCTTTTGGGATG 26895 Query 160110 ATTGGCCTTGCTCTTAATCTTCGTGCTTACGATTTCGTAAGTCAAGAGATCAGAGCAGCA 160169 |||| || || | ||| | | || |||||||| || ||||||| | ||||||| Sbjct 26894 GTTGGTCTGGCCTTAAATTTAAGGGCATACGATTTTGTGTCTCAAGAGTTACGAGCAGCC 26835 Query 160170 GAAGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAACGAAGGACTACGT 160229 |||||||| ||||| || || || || |||||||| || | | || |||||| | ||| Sbjct 26834 GAAGATCCTGAATTCGAAACGTTTTATACCAAAAATATATTGCTTAATGAAGGAATCCGT 26775 Query 160230 GCATGGTTGGCACCTGC-TGATCAACCCCATGAAAACTTTATCTTCCCAGAAGAAGTATT 160288 || || |||| ||| || ||||| |||||||| || || |||||||| ||||| || Sbjct 26774 GCTTGAATGGC-TATGCAGGACCAACCTCATGAAAATTTCATTTTCCCAGAGGAAGTTTT 26716 Query 160289 GCCTAGAGGCAACGCCCTTTAATAAA 160314 ||| | || || || || ||| ||| Sbjct 26715 ACCTCGCGGAAATGCTCTCTAACAAA 26690 >seq11659 Length=22639 Score = 87.8 bits (96), Expect = 2e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 155055 GTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGCCACAGGTTCGAGTCCTGT 155114 ||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||| |||||| Sbjct 16981 GTAGCTCAGCTGGATAGAGCATCTGCCTTCTAAGCAGACGGTCACAGGTTCGAATCCTGT 17040 Query 155115 C 155115 | Sbjct 17041 C 17041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547368886990800