Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq13327 410 1e-109 seq303 398 8e-106 seq4610 95.1 1e-14 seq6720 91.5 2e-13 >seq13327 Length=3816 Score = 410 bits (454), Expect = 1e-109 Identities = 663/950 (70%), Gaps = 4/950 (0%) Strand=Plus/Minus Query 150868 CCGTCTGTATGTCGGTTGGTTCGGTGTGCTGATGATTCCAACTCTGTTGGCAGCAACCAT 150927 |||||| ||| |||| ||||| || | | ||| | ||||| | || |||| Sbjct 2796 CCGTCTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGCAGTATC 2737 Query 150928 TTGCTTCATCGTGGCATTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACC 150987 || ||||| | || || | || || || || || || || ||||| || ||||| || Sbjct 2736 GTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGCC 2677 Query 150988 CGTTGCTGGTTCTCTGATGTACGGTAACAACATCATCTCTGGTGCTGTTGTTCCTTCTTC 151047 ||| | || ||||| | ||||| || || || ||||| || || || || || ||| Sbjct 2676 AGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTTC 2617 Query 151048 TAACGCTATCGGTCTGCACTTCTATCCCATCTGGGAAGCAGCCTCTCTCGATGAATGGCT 151107 || ||||| ||| |||| || ||| | | || || || | | | || ||||| | Sbjct 2616 AAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGATT 2557 Query 151108 CTACAACGGTGGTCCTTTCCAACTCGTTGTCTTCCACTTCCTGATTGG--TATCTATGCT 151165 || ||||| || |||| |||| ||||||| | || ||| | || || || | || | Sbjct 2556 GTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGC-AT-CA 2499 Query 151166 TACATGGGTCGTGAGTGGGAACTGTCTTACCGCTTGGGTATGCGTCCCTGGATCTGCGTT 151225 || | ||||||||||| ||| | |||||| || || |||||||| || || | ||| Sbjct 2498 TATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTA 2439 Query 151226 GCATACTCTGCTCCAGTTGCTGCTGCGAGTGCAGTGTTCCTCGTCTATCCTTTCGGTCAA 151285 || | |||||| |||||||| || || || || || || || || || |||| ||| Sbjct 2438 GCTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAA 2379 Query 151286 GGTTCTTTCTCTGATGCAATGCCCCTGGGTATTTCTGGCACATTCAACTACATGCTTGTC 151345 || ||||| || |||| |||||| || || |||||||| |||||||||| |||||| || Sbjct 2378 GGATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTA 2319 Query 151346 TTCCAAGCAGAGCACAACATTCTGATGCACCCCTTCCATATGCTTGGTGTGGCTGGTGTC 151405 ||||| |||||||| || || | |||||||| ||||| ||| ||| ||||| || || Sbjct 2318 TTCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTA 2259 Query 151406 TTCGGTGGATCGCTCTTCTCGGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGT 151465 || || ||||| | || || ||||| || ||| | ||||| || | | || | Sbjct 2258 TTTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCT 2199 Query 151466 GAGACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 151525 ||| | ||| | || || | || ||||| || || ||||| || ||| | || || Sbjct 2198 ATGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACA 2139 Query 151526 TACAACATCGTTGCCGCACACGGTTACTTTGGTCGTCTCATCTTCCAATACGCTTCCTTC 151585 || || ||||| ||||| ||||| ||||| || ||||| ||||| |||| ||| || Sbjct 2138 TATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTT 2079 Query 151586 AACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTC 151645 || || || ||||| | ||||||||||| ||| || || || || || ||||| || Sbjct 2078 AATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTA 2019 Query 151646 ACTGCACTTGGTGTCAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCC 151705 || ||| | || | || || ||||| ||||| || || || ||||| |||||||| || Sbjct 2018 ACAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCA 1959 Query 151706 ATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTGAACCGTGCAGGT 151765 ||||| |||| | || || | | || || || | | || |||||| | Sbjct 1958 ATCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAAT 1899 Query 151766 CTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGA 151815 || || |||||||| ||||| |||||||| || ||||| |||||||| || Sbjct 1898 CTAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGA 1849 >seq303 Length=42796 Score = 398 bits (440), Expect = 8e-106 Identities = 673/972 (69%), Gaps = 2/972 (0%) Strand=Plus/Minus Query 152401 TTTGTTGGTTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGG 152460 |||||||| || || ||| | | |||||||| || |||||| | || | || || || Sbjct 27668 TTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGAGGATGA 27609 Query 152461 CTTACTGGGACTACTTTCGCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTG 152520 || || |||||||||| || ||||||||| |||| || | ||| | |||||| Sbjct 27608 TTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGCTATCTA 27549 Query 152521 GAGGGCGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCT 152580 || || || ||| | ||||| || || || || || || || ||||| || || Sbjct 27548 GAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGGCACTCG 27489 Query 152581 CTTCTGCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGA 152640 ||| | | | || ||||| || ||||| || ||| ||||| ||| | ||| Sbjct 27488 CTTTTATTACCTTGAGGTCCCGAAGCTCAGGGACTTTTAACTCGATGGTATCAAGTTGGA 27429 Query 152641 GGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTC-G 152699 || | || |||| | || | || ||| | || | | || || || || | Sbjct 27428 GGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTT-TGTTTAAG 27370 Query 152700 CCAGTTTGAACTGGCACGTCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGG 152759 || |||||| | ||| | | | | ||||| || ||||| ||||| ||| | || Sbjct 27369 ACAATTTGAAATTGCAAGGTTAGTGCAGGTTCGTCCATATAATGCAATTGCTTTCACCGG 27310 Query 152760 TCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTT 152819 ||| || || |||||||| |||||| | || || ||| | |||||| ||||||| || Sbjct 27309 TCCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGAGTTGATT 27250 Query 152820 TTTCGCTCCATCTTTCGGGGTCGCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGGATT 152879 ||| || ||| ||| || || || || || || |||| | || ||| ||||||| || Sbjct 27249 TTTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTTCAAGGGTT 27190 Query 152880 CCACAACTGGACATTGAATCCGTTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGC 152939 || ||||| ||| ||||||| || |||||||||||||| ||||||||||| ||||| || Sbjct 27189 TCATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTAGGAGGTGC 27130 Query 152940 CTTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTGTATCAAGATGGTGAACA 152999 || | |||||||| ||||| | || ||| | ||||| || ||| ||||||||| Sbjct 27129 GTTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAAGATGGTGTGTC 27070 Query 153000 AGCAAACACTTTCAAAGCTTTCGACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTAC 153059 |||| || ||||| | || ||| ||||||||| ||||| ||||| || Sbjct 27069 GTATGACACCTTTCGTGCTTTTAGCCCAACGCAATTAGAAGAGACTTATTCAATGGTAAC 27010 Query 153060 TGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCA 153119 || || ||||| || || ||||| |||||| | |||||| || || || ||| | || Sbjct 27009 CGCAAATCGTTTTTGATCTCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGTTGGTTACA 26950 Query 153120 TTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGG 153179 |||||||||| | || ||||| || | || | || || ||| || |||| || |||| Sbjct 26949 TTTCTTTATGTTATTCGTACCGGTAACTGGCTTATGAACTTCTGCTTTTGGGATGGTTGG 26890 Query 153180 TCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGA 153239 ||| || | ||| | | || ||||||||||| |||||||| | | || | ||||| Sbjct 26889 TCTGGCCTTAAATTTAAGGGCATACGATTTTGTGTCTCAAGAGTTACGAGCAGCCGAAGA 26830 Query 153240 TCCTGAATTTGAGACGTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTG 153299 ||||||||| || ||||| ||||| || ||||| | | || ||||| | |||||||| Sbjct 26829 TCCTGAATTCGAAACGTTTTATACCAAAAATATATTGCTTAATGAAGGAATCCGTGCTTG 26770 Query 153300 GTTGGCACCTGTTGACCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACG 153359 |||| |||||||||||||| || ||| | ||||| || || || || || || Sbjct 26769 AATGGCTATGCAGGACCAACCTCATGAAAATTTCATTTTCCCAGAGGAAGTTTTACCTCG 26710 Query 153360 AGGCAACGCTCT 153371 || || ||||| Sbjct 26709 CGGAAATGCTCT 26698 >seq4610 Length=4342 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 9773 GGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 9831 ||||||||||||||| ||| |||||||||||| ||||| |||||| |||| |||||||| Sbjct 2147 GGGGAATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCATCGGTTCGAC 2206 Query 9832 TCCGCTATTCTCCA 9845 |||| ||||||||| Sbjct 2207 TCCGATATTCTCCA 2220 >seq6720 Length=8428 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 148131 CGGGGTGTAGCTTAGCTTGGT-AGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAA 148189 ||||||||||| |||| ||| | ||||| ||||||||||| ||||||||||||||| | Sbjct 50 CGGGGTGTAGCGTAGCCCGGTTATCGCGCCTGCTTTGGGAGCAGGAGGTCGCAGGTTCGA 109 Query 148190 ATCCTGCCACCCCGA 148204 ||||||||||||||| Sbjct 110 ATCCTGCCACCCCGA 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548614598626800