Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq13327 410 1e-109 seq303 306 4e-78 >seq13327 Length=3816 Score = 410 bits (454), Expect = 1e-109 Identities = 629/895 (70%), Gaps = 4/895 (0%) Strand=Plus/Minus Query 72325 TGTTTCATTGTAGCATTCATCGCTGCTCCTCCAGTCGATATCGACGGAATCAGAGAACCA 72384 |||||||||| || || | || || || ||||| ||||| || ||||| | || ||| Sbjct 2735 TGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGCCA 2676 Query 72385 GTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCA 72444 ||| | || ||| | |||| || || || || ||||| || || ||||| || |||| Sbjct 2675 GTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTTCA 2616 Query 72445 AACGCAATAGGATTACACTTCTATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGTTG 72504 || || || || | || || ||| | | || || || ||| || || || ||| Sbjct 2615 AATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGATTG 2556 Query 72505 TATAACGGAGGTCCTTACCAGTTAGTTATTTTCCACTTCCTTATTGGAATCTCTGCCTAC 72564 ||||||||||| |||||||| || ||| | | || ||| | || || | | | || Sbjct 2555 TATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCATAT 2496 Query 72565 ATGGGTAGACAGTGGGAACTATCATACAGACTAGGAATGAGACCTTGGATATGTGTAGCA 72624 | ||| | |||| ||| || ||| | |||||||| | ||||| || | ||||| Sbjct 2495 CTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAGCT 2436 Query 72625 TACTCAGCACCTGTATCTGCAGCATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGT 72684 | ||| ||||| || | ||||||| || ||||| || || || ||| |||| || || Sbjct 2435 TTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAGGA 2376 Query 72685 TCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTC 72744 || || || ||||| ||||| ||||| || || || || |||||||||||| | || ||| Sbjct 2375 TCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTATTC 2316 Query 72745 CAAGCAGAACACAACATACTAATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTC 72804 || ||||| || || || |||||||||| ||||| ||||| || || ||||| | || Sbjct 2315 CAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTATTT 2256 Query 72805 GGTGGTAGTCTCTTCAGTGCAATGCACGGTTCACTTGTTACTTCATCTCTAATCAGAGAG 72864 || || | | || ||||| ||||| || || | ||||| ||| || |||| | Sbjct 2255 GGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTATG 2196 Query 72865 ACAACAGAGAACGAGAGTCA--AAACTACGGCTATAAGTTCGGACAAGAAGAAGAAACAT 72922 || || ||| || ||| || || || ||||| |||||||| ||| | ||||||| Sbjct 2195 AC--TAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACAT 2138 Query 72923 ATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAATCTTCCAGTATGCATCATTCA 72982 |||| || || || || || ||||||||||| | ||||||| || | ||| || | Sbjct 2137 ATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTA 2078 Query 72983 ACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCCCTGTAGTCTGTGTATGGTTAA 73042 | ||||| ||||| |||||||||||||| || | | || ||||| | | || |||| Sbjct 2077 ATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAA 2018 Query 73043 CCTCAATGGGTATCTGTACAATGGCATTCAACCTTAACGGATTCAACTTCAACCAATCAG 73102 | ||||||| || |||| ||||| ||||| || || |||||||| |||||||||||| Sbjct 2017 CAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAA 1958 Query 73103 TTGTAGATGCAAACGGAAAGATTGTACCAACATGGGGAGATGTTCTTAACAGAGCAAACC 73162 | | |||||| | ||| | | | | || | ||| | | || | ||||| | Sbjct 1957 TCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATC 1898 Query 73163 TTGGAATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 73217 | ||||||||||| |||||||| | || || ||||| ||||| ||||| |||| Sbjct 1897 TAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGATTTAGC 1843 >seq303 Length=42796 Score = 306 bits (338), Expect = 4e-78 Identities = 677/1006 (67%), Gaps = 37/1006 (4%) Strand=Plus/Minus Query 73404 TATTCATCGGATGGTCTGGTCTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTT 73463 |||| | || || || || | || ||||| || ||||| | || ||||||| | Sbjct 27670 TATTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGAGGAT 27611 Query 73464 GGTTCGTAGGAACTACTTTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATC 73523 | || || || ||||||||||| || ||||| | |||||| | ||||| |||| Sbjct 27610 GATTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGCTATC 27551 Query 73524 TTGAGGGAGCAAATTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATA 73583 | || || |||||||||||||| || ||||| || || | | || ||||| || Sbjct 27550 TAGAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGGCACT 27491 Query 73584 GTCTATTGTTCCTTTGGGGACCAGAGGCACAAGGAGATCTTGTA---CGATGGTTTCAAT 73640 || || || | ||| || || || || || ||| ||| || ||||||| |||| Sbjct 27490 CGCTTTTATTACCTTGAGGTCCCGAAGCTCAGGGA---CTTTTAACTCGATGGTATCAAG 27434 Query 73641 TAGGTGGACTATGGAACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGC 73700 | || || |||| || ||| | || || ||||| ||| || | ||| || || Sbjct 27433 TTGGAGGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTT-TGT 27375 Query 73701 TTA-GACAGTTTGAGATTGCAGGACTTGTTGGGATACGTCCTTACAACGCATTAGCTTTT 73759 ||| |||| ||||| |||||| | | || | | ||||| || || ||| | ||||| Sbjct 27374 TTAAGACAATTTGAAATTGCAAGGTTAGTGCAGGTTCGTCCATATAATGCAATTGCTTT- 27316 Query 73760 TCAGCAGTT--ATCGCAGTATTCACGAGCATCTTTCTAATATATCCTTTAGGACAGCATA 73817 || | || || ||||| || ||||| |||| ||||||||||| || | Sbjct 27315 -CACCGGTCCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGA 27257 Query 73818 GTTGGTTCTTCGCACCTTCATTCGGTGTCGCAGCAATCTTTCGTTATATTTTATTCATAC 73877 |||| || || ||||| || || || || || || ||| | | | | ||||| | | Sbjct 27256 GTTGATTTTTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTTC 27197 Query 73878 AGGGTTTCCACAATATAACTCTTAATCCATTTCATATGATGGGTGTAGCAGGTATACTTG 73937 | || || || || ||| || ||||| || |||||||||||||| |||||||| | | Sbjct 27196 AAGGGTTTCATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTAG 27137 Query 73938 GTGGAGCATTACTATGTGCCATACATGGTGCAACAGTACAGAACACATTGTATGAAGACA 73997 | || || ||| | | |||||| ||||| || || ||||| || || || ||| || Sbjct 27136 GAGGTGCGTTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAA---- 27081 Query 73998 CATCACAATACACTGAAGGTAAGATTCAATCTACAACTTTCAGAGCATTCGATCCTACAC 74057 || ||| | || ||| ||||| | || || || || | Sbjct 27080 --------------GATGGT--GTGTCGTATGACACCTTTC-GTGCTTTTAGCCCAACGC 27038 Query 74058 AGGAAGAAGAGACTTATAGTATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTA 74117 | ||||||||||||| ||| | || || || | || || || ||||| ||||| Sbjct 27037 AATTAGAAGAGACTTATTCAATGGTAACCGCAAATCGTTTTTGATCTCAGATTTTTGGAG 26978 Query 74118 TAGCATTTTCAAACAAAAGATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTA 74177 |||| ||||| ||||| | | ||||| ||| ||||||| |||||||| || | || Sbjct 26977 TAGCTTTTTCTAACAAGCGTTGGTTACATTTCTTTATGTTATTCGTACCGGTAACTGGCT 26918 Query 74178 TGTGGACATCATCTATAGGTATCGTAGGTCTAGCACTTAACCTT-AGAGCATACGACTTT 74236 | || || || || | || || || ||||| || ||||| || || |||||||| ||| Sbjct 26917 TATGAACTTCTGCTTTTGGGATGGTTGGTCTGGC-CTTAAATTTAAGGGCATACGATTTT 26859 Query 74237 GTATCTCAAGAGATAAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAAC 74296 || ||||||||| || ||||||| ||||| || || || ||||| || || || || || Sbjct 26858 GTGTCTCAAGAGTTACGAGCAGCCGAAGATCCTGAATTCGAAACGTTTTATACCAAAAAT 26799 Query 74297 ATTCTTCTTAATGAAGGTATGAGAGCATGGATGTCATCTG-TCGATCAACCCCATGAGAA 74355 || | ||||||||||| || | || || ||| | | || || ||||| ||||| || Sbjct 26798 ATATTGCTTAATGAAGGAATCCGTGCTTGAATGGC-TATGCAGGACCAACCTCATGAAAA 26740 Query 74356 CTTTGTGTTCCCAGAAGAAGTCTTGCCACGAGGCAACGCACTATAA 74401 || | |||||||| ||||| || || || || || || || ||| Sbjct 26739 TTTCATTTTCCCAGAGGAAGTTTTACCTCGCGGAAATGCTCTCTAA 26694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571823164645200