Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_021867.1 Length=46978 Score E Sequences producing significant alignments: (Bits) Value seq32154 181 3e-41 seq25272 179 1e-40 >seq32154 Length=8728 Score = 181 bits (200), Expect = 3e-41 Identities = 323/468 (69%), Gaps = 10/468 (2%) Strand=Plus/Plus Query 35343 TGTGGTTGCTCACTTTCACTTAGTAATGG-TATTTCTGCATTGTACGGATTCTTTGCTGG 35401 ||| || || ||||| || || ||||||| ||| || ||| |||| || || ||||| || Sbjct 6803 TGTAGTGGCACACTTCCATTTGGTAATGGGTATCTCGGCACTGTATGGTTTATTTGCCGG 6862 Query 35402 TGTTTACCACTGGTTTCCAAAAATGTTCGGGCGTA---TGATGAATAAAAATTTAGGTTA 35458 || || || ||||||||||| ||||||| ||| ||||||| |||||| | || || Sbjct 6863 AGTGTATCATTGGTTTCCAAAGATGTTCGAAAGTAAAATGATGAACAAAAATCTGGGATA 6922 Query 35459 TATTCACTTTTGGATTACTGCAATTTGTGCTTATGGTGTTTTCTATCCAATGCACTTTAT 35518 || || ||||||||||| || ||| || | ||||| | |||| || ||||||||| | Sbjct 6923 CATCCATTTTTGGATTACGGCCATTGGTTCCTATGGAATATTCTTCCCCATGCACTTTGT 6982 Query 35519 AGGGATGGCTGGATTACCACGTCGTTACTACACAAATACTAACTTTCCATTATTTGATGA 35578 || ||||| ||| ||||| | | || ||| ||||| ||||| | || ||||| Sbjct 6983 GGGTATGGCCGGAGTACCAAGGAGATATTACGAGAATACAGCATTTCCTATGTTCGATGA 7042 Query 35579 TTTAGCTGATGTGAATAAAGTAATTACTAC---TTTTGCTTTGATTGGAGCAGCTTTCCA 35635 || | ||||| |||| ||| || |||||| ||||| |||||| || Sbjct 7043 ATTGACCGATGT---ACAAGTCCTTATGACGGTTTTTGCATTGATAACGGCAGCTGCGCA 7099 Query 35636 ATTGGTATTTATGTGGAATTTCTTTACTAGTATTTTTTACGGaaaaaaaGCTGTGCAAAA 35695 |||||| || | || || | | ||||||||| || || ||||||| | | || Sbjct 7100 ATTGGTCTTCGCCTATAACTTTATCAGTAGTATTTTCTATGGTAAAAAAGGACCGAAGAA 7159 Query 35696 TCCATGGAGGTCTAATACTCTTGAGTGGACTACACCAGTGGAACATGTACATGGAAACTG 35755 ||| |||| | | |||| | || ||||| | || ||||| | |||||||| || Sbjct 7160 TCCTTGGAACGCGACTACTTTGGAATGGACGGCCGAGGTAAAACATATTCATGGAAATTG 7219 Query 35756 GCCAGGTGCTATCCCAGAAGTTTATAGATGGCCTTATGATTACAGTAA 35803 | ||| | || || | ||| || | ||| | |||||||| || || Sbjct 7220 GGACGGTCCCATACCGCATGTTCATCGTTGGGCCTATGATTATAGCAA 7267 >seq25272 Length=34676 Score = 179 bits (198), Expect = 1e-40 Identities = 323/464 (70%), Gaps = 6/464 (1%) Strand=Plus/Minus Query 39897 CACAATACATCTGTAAAATAAAATTCTGCGTAAGCTATTTGCCATAACAGAAAATTACTA 39956 || ||||| || ||||||| ||||| || || ||||| ||||| | || |||||| || Sbjct 11323 CAAAATACGTCAATAAAATATAATTCCGCATACGCTATCTGCCAAAGCAAAAAATTGCTG 11264 Query 39957 ATGCGGTGTTCGCCACTTGTTCTTATTACTAAATCTACATCAGGTAGATTATGCGTGTAA 40016 || | ||||| ||||| || | || | || || ||||| |||| || ||||||||| Sbjct 11263 ATCCTATGTTCCCCACTGGTACGGATCAACAAGTCCACATCTGGTAAATCGTGCGTGTAA 11204 Query 40017 AGATGCTTATTTAATATTGAATCGTCAATAGAATCTATTGAAATTATATTATTTTTAACT 40076 ||||| |||||| || | ||||||||| || ||||||||||||||||||||| Sbjct 11203 AGATGGCTATTTATAATGGTTTCGTCAATATTTTCAGGAGAAATTATATTATTTTTAACT 11144 Query 40077 TTATCACTAAT-TATTTTAACAGCATTTATGATTTCTTCTCTCGATCCGTAGCTTAATGC 40135 || ||| || | | || | |||||| | | ||| || | | ||||| || | || Sbjct 11143 TTGCTACTTATCTGCTGTATC-GCATTTTTCAATTCCTCGCGAGCGCCGTAACTAAGGGC 11085 Query 40136 TAAGGTAAGGGTCATTCTGGTATTGTTTTTTGT-TTGCGCTATTACTTCGAGCAATTCTT 40194 || ||||||||||| | |||| || || || || || || ||||| | ||| || | Sbjct 11084 CAAAGTAAGGGTCATCCCCGTATGGTGATTCGTCTTTTGC-ATAACTTCCAACAACTCGT 11026 Query 40195 TTTGAACTGATTTTGGTAAATTATC-AAGGTTTCCTATCGAATTTAACTTTATGTTGTTT 40253 || || |||||| || | ||| || | || || | |||||| | | |||||| Sbjct 11025 CCTGGGCTTTTTTTGGCAA-TGATCCAATATCACCAATGGTGTTTAACCTAACATTGTTT 10967 Query 40254 TTTACTAAGGTTGCTAAttttttttttAAGGAATTAATTAGTATTTTCATTAACAAATCG 40313 | | ||||| | || ||||||||||| | | | ||||||||| ||| Sbjct 10966 TCCTCAAAGGTCCGGAGTTCCTTTTTTAAGGAGGAGACCAAAAGTTTCATTAAGGTATCC 10907 Query 40314 ACTTCTAATTTTGGACGGTTCCAATTTTCGGTCGAAAAATTATA 40357 ||||| | ||| || || ||||||||||| || ||||| |||| Sbjct 10906 ACTTCCAGTTTCGGTCGTTTCCAATTTTCAGTGGAAAATGTATA 10863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149946346113200