Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq37644 98.7 9e-16 seq9473 95.1 1e-14 >seq37644 Length=6317 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| | | ||||| || ||||| || || | || | || || ||| | || Sbjct 4332 ATGCAGATTTACGTAAAAACTCTGACCGGGAAGACGGTCACTTTAGATGTTGAACCTTCC 4391 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||| || | ||| |||| ||| |||| || |||||||||||||| | || || ||||| Sbjct 4392 GACTCAATTGAAGCGGTGAAAGAAAAAATTCAAGACAAAGAAGGGACCCCGCCTGATCAG 4451 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||| || || || || || |||||| | ||| | || || || || Sbjct 4452 CAGAGACTTATCTTCGCAGGCAAGCAACTTGAGGATGGGCGAACTCTCTCCGACTACAAT 4511 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| | |||||||| || || | |||||| Sbjct 4512 ATTGAGAAGGAATCCACCCTCCGCTTGGT 4540 >seq9473 Length=1265 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || ||||| || || || | Sbjct 1098 ATGCAGATCTTCGTGAAGACTCTCACCGGAAAGACGATCACTCTCGATGTGGAGCCCTCT 1157 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||| | | || | || || ||||||||| ||||| || || || || |||||||| Sbjct 1158 GACTCTATCGAGAACGTCAAGGCAAAGATCCAGGACAAGGAGGGGATTCCCCCCGATCAG 1217 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || ||| ||||||| ||||| || ||||| ||||| Sbjct 1218 CAGCGTCTGATCTTCGCCGGAAAGCAGCTCGAGGA 1252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449072656513200