Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq43861 111 1e-19 seq19149 111 1e-19 >seq43861 Length=3806 Score = 111 bits (122), Expect = 1e-19 Identities = 194/279 (70%), Gaps = 9/279 (3%) Strand=Plus/Plus Query 95581 GTCACCCATTCCCATGAGCTGCTCGGCTCCACCCTCGTCCAGGATCACCCGGCTATCGGT 95640 ||| ||||| |||| || || ||| | || |||| |||||||| ||||| ||| | Sbjct 2677 GTCGCCCATGCCCAGCAGGTGTTCGCCGCCCGACTCGCCCAGGATCGTGCGGCTGTCGAT 2736 Query 95641 GAGTGATGCTG---TGGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGT 95697 || || || ||| || || | | | ||| | |||| ||||| || || Sbjct 2737 CT-TGCTGGTGACCTGG--AAGGAAATGCGGGTCGGGAAATTGGCCTTGATGGTACCGGT 2793 Query 95698 GACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATGCCGGCTGCGCGCGC 95757 || || ||||| ||||| ||||| ||||||| || | || |||||||| |||||||| Sbjct 2794 GATGACGTCCACCGAGGGGCGCTGGGTCGCCATGATCAAGTGGATGCCGGCCGCGCGCGC 2853 Query 95758 CTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAG 95817 | |||| |||| ||| || ||||| || || |||| | || ||| ||| || Sbjct 2854 CATCTGCGCGAGGCGCTGGATCGCCGCCTCCACCTC---CTTGCCGGCGACCAGCATCAG 2910 Query 95818 GTCTGCCAGCTCGTCGACCACTACCACGATGTAGGGGAG 95856 ||| |||| ||||||||| | |||||||||||||| || Sbjct 2911 GTCCGCCATCTCGTCGACGATCACCACGATGTAGGGCAG 2949 Score = 104 bits (114), Expect = 2e-17 Identities = 196/279 (70%), Gaps = 12/279 (4%) Strand=Plus/Plus Query 95872 GTGGCGCACGCCG-GCTTCCTGCATCTGCCGGTACCGGTCATCCATCTC---CACGGTGA 95927 || |||||||||| || || ||| |||||| || || ||||| || ||||| Sbjct 3082 GTTGCGCACGCCGAGCCGGCT-CATGGCCCGGTAGCGCTCCTCCATTTCGCGCACGGC-- 3138 Query 95928 GCCACCGCAGCGTCTTAACCGCCTCGTCGGGCTCGGTGACCACCGG-CTGCAAAAGGTGG 95986 |||| |||| || |||| | |||||||| |||||||| ||| | || ||| Sbjct 3139 -CCACTTGAGCGCGACCACGGCCTTCTTCGGCTCGGTCACCACCGGACTG-AGCAGATGG 3196 Query 95987 GGGATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGA-GCTTGAC 96045 || || || | ||| | | ||||||| ||||||||| |||| |||||||| || || Sbjct 3197 GGAATCCCATCGTAGACGCTCAGTTCCAGCATCTTCGGATCGACCATGATGAAGCGGCAC 3256 Query 96046 CCGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTT 96105 | | || || | ||||| |||| ||||| | ||| | ||||| | || ||||| Sbjct 3257 CTG-TCCGGCCCGTGCCGGTACAGCAGCGAAACGATCATGGCGTTGACGGAGACCGACTT 3315 Query 96106 GCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCAT 96144 |||||| ||||| | || ||||| |||||||| ||||| Sbjct 3316 GCCCGAACCGGTCGTACCGGCCACAAGCAGGTGCGGCAT 3354 >seq19149 Length=5546 Score = 111 bits (122), Expect = 1e-19 Identities = 149/207 (72%), Gaps = 14/207 (7%) Strand=Plus/Plus Query 95945 ACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGG 96004 ||||||| | |||||||| |||||||| ||| ||||||||||| |||| || Sbjct 1617 ACCGCCTTCTTCGGCTCGGTCACCACCGGGGCCAAGAGGTGGGGGATGCCGTCATAGACC 1676 Query 96005 GTGAGTTCCACCATCTTCGGGTCGATCATGATGAGCTTGACCCGATCAGGATT--GGC-- 96060 | || |||| |||||| ||||||| |||||||| |||| |||| || ||| Sbjct 1677 GACAGCTCCAGCATCTTGGGGTCGACCATGATGAACTTG-------CAGGCTTCCGGCCC 1729 Query 96061 ---TCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGT 96117 |||||||||| || | | ||| | |||||| ||||||||||| ||||| Sbjct 1730 CAGGCGGTAGAGCAGCGACAGGATCATGGCGTTGATCGCCACCGACTTGCCCGAACCGGT 1789 Query 96118 GGCGCCAGCCACCAGCAGGTGGGGCAT 96144 || ||| |||||||||| ||||||||| Sbjct 1790 GGTGCCGGCCACCAGCACGTGGGGCAT 1816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351118351851890