Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq30971 187 4e-42 >seq30971 Length=2415 Score = 187 bits (206), Expect = 4e-42 Identities = 221/298 (74%), Gaps = 6/298 (2%) Strand=Plus/Minus Query 35547 CCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACA 35606 ||||| || ||||| || |||||||| || |||||| ||||||||| ||||| Sbjct 1709 CCTTCATTGGCGTAGACCTTGGCCGGCAGCGGCGTGGTGTTGGAGAACTCCAGGGTCACG 1650 Query 35607 TGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACGATGATACCACAGCGCGCGTAG 35666 ||||| |||||||| || |||||||| ||||| ||||||||||| || |||||||| ||| Sbjct 1649 TGACCCTCCCACTCCGGCTCCAGCGGTGTCACATTGACGATGATCCCGCAGCGCGCATAG 1590 Query 35667 GTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGAATGCGGAAGTATTCGACCGTG 35726 || ||| |||| || | ||| || |||| |||||||||||||||||| || |||||| Sbjct 1589 GTCGACTTGCCCAGGCAGATCACCAGAACGTCGCGCGGAATGCGGAAGTACTCAACCGTG 1530 Query 35727 CGTGCCAGAGCGAAGCTGTTCGGCGGAATCAGGATGCTGTCAGCCTTAACCGGCT---GC 35783 || ||||| ||||| |||||||| || ||||| | | | || | ||| Sbjct 1529 CGCGCCAGCACGAAGGAATTCGGCGGGAT---GATGCAGACCTCGGTATCGCGCTCAACA 1473 Query 35784 AGGCACTTGGGATCGAAGTTCTTCGGATCAACCACTGCGCTGTTGATGTTGGTGAAGA 35841 | || || | ||||||||| || || |||| |||| ||| || |||||||||| Sbjct 1472 AAGCTCTGGTCCGAGAAGTTCTTGGGGTCCACCAGTGCGTTGTCGACATTGGTGAAGA 1415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 824402378307600