Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq9473 109 4e-19 seq62509 87.8 1e-12 >seq9473 Length=1265 Score = 109 bits (120), Expect = 4e-19 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 34815 TGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCC 34874 |||| | || || || |||||||||||||||||||| || ||||| || | || | || Sbjct 1260 TGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGGGGAATCC 1201 Query 34875 CCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAA 34934 |||||||||| | || ||| |||||| | || || ||| || ||| ||||| | Sbjct 1200 CCTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCGATAGAGTCAGAGGGCTCCACATCGA 1141 Query 34935 CGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || |||||||| ||||| ||||| || ||||||||||| Sbjct 1140 GAGTGATCGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 1098 >seq62509 Length=1081 Score = 87.8 bits (96), Expect = 1e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| ||||| | ||| ||||| |||| ||||| ||||| ||| | ||| | || Sbjct 862 CAGGACAAGGTGCAGGGTCGTCTCCCTCTGGATGTTGTAGTCTGATGCAGTTCGCCCGTC 803 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || || ||||| | || |||| ||| ||||| ||| ||| | |||||||||||| Sbjct 802 CTCGAGCTGTTTTCCCGAAAATATCAATCGCTGCTGATCTGCCGGGATCCCCTCCTTGTC 743 Query 34885 GTTTATTTTTTGTTTGAC 34902 | || |||| |||||| Sbjct 742 CTGAATCTTTTCTTTGAC 725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325110531501110