Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_022988.1 Length=74210 Score E Sequences producing significant alignments: (Bits) Value seq1485 253 1e-62 seq53971 250 1e-61 >seq1485 Length=10108 Score = 253 bits (280), Expect = 1e-62 Identities = 522/767 (68%), Gaps = 17/767 (2%) Strand=Plus/Plus Query 64676 CATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGG 64735 |||| |||||||||| | | |||| ||| || || ||||| || ||| | || Sbjct 3098 CATTTCCACCGGCTCGCTGGGCTTGGATATCGCGCTCGGGATCGGCGGCGTCCCCCGCGG 3157 Query 64736 CCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGC 64795 || | || || ||||||||||| ||||| || || ||| | || ||| || ||| Sbjct 3158 GCGCATTGTCGAGATCTACGGCCCGGAATCCTCCGGAAAGACCACCCTGGCGCTGCACAT 3217 Query 64796 GGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCT 64855 | ||| | || ||||| ||||| || | || || | | |||| |||||||| | | Sbjct 3218 CGCCGCCGAGGCTCAGAAAGCCGGCGGAACGGCAGCTTTCGTCGATGCTGAGCATGCTTT 3277 Query 64856 GGACCCTGAG-TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGC 64914 |||||| ||| || || | | ||| ||||| || ||||| | || || | |||| Sbjct 3278 GGACCC-GAGCTATGCGACGAAGCTGGGTGTCGATATCGACGAGCTGCTGATCAGCCAGC 3336 Query 64915 CGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGT 64974 |||| | |||||||||||| ||||||| | ||| || || || |||| | | Sbjct 3337 CGGATGCCGGCGAGCAGGCCTTGGAGATTGCCGACACGCTGGTGCGCTCCGGCGCGGTCG 3396 Query 64975 CCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACA 65034 | | | || | ||||| || ||||| || |||||||| ||||| ||||| ||||| | Sbjct 3397 ACGTGCTGGTGATCGACTCCGTTGCGGCGCTCGTGCCGCGGGCCGAACTCGAGGGCGAGA 3456 Query 65035 TCGGGGA-CAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTC 65093 | || || ||| | | || ||||| |||||||| ||| || || |||||||||| Sbjct 3457 TGGGCGATCAGATGCCT-GGACTGCAGGCGCGCCTGATGAGCCAAGCTCTGCGCAAGCTG 3515 Query 65094 ACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAG 65153 ||| | | ||||||| || |||| || | ||| |||||||| | || |||| Sbjct 3516 ACCTCCTCGATCTCCAAGTCCCACACCCTTGTGATCTTCATCAACCAGATCCGTATGAAG 3575 Query 65154 ATCGGCAACGTGGGCTACGG----CCCGAATGAGACCACCACGGGCGGCAAGGCTTTGAG 65209 |||||| | || | ||| |||||| || ||| | |||||||| || |||| Sbjct 3576 ATCGGCGTCATG---TTCGGGAGCCCCGAA----ACAACCTCTGGCGGCAACGCGTTGAA 3628 Query 65210 GTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGA 65269 |||||| |||| || || | ||| | || || |||| | ||||| ||||| Sbjct 3629 GTTCTATTCCTCGGTTCGTCTCGATATTCGGCGGATCGGTGCGATCAAGGACCGCGATAC 3688 Query 65270 GGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCG 65329 | |||||||||| || || || || || ||||||||||||||||| |||||| || Sbjct 3689 CGTCGTCGGCAACCAGACGCGCGTCAAAGTGGTCAAGAACAAGCTGGCTCCGCCGTTTCG 3748 Query 65330 CAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCG 65388 || |||||| || |||||||| |||| ||||| | || || |||| | |||| Sbjct 3749 GGTCGTGGAGTTCGATATCATGTACGGGCAGGGGATCTC-CAAGACGGGCGAATTGCTCG 3807 Query 65389 ACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTC 65435 | || | || | ||| | ||| ||||||| || ||||||||| Sbjct 3808 ATCTCGGAGTTCAGGCCGGCGTCGTGGAGAAGTCCGGAGCCTGGTTC 3854 >seq53971 Length=16181 Score = 250 bits (276), Expect = 1e-61 Identities = 499/732 (68%), Gaps = 17/732 (2%) Strand=Plus/Plus Query 64711 TGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAG 64770 |||||||||| || ||| | |||||||| || || |||||||| || ||| ||| | Sbjct 6828 TGGGCATCGGCGGCCTGCCGCGCGGCCGGGTCGTCGAGATCTACGGGCCGGAAAGTTCCG 6887 Query 64771 GGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCG 64830 | || | || ||| || || | |||||| | |||||||| |||| || | | | Sbjct 6888 GCAAAACGACCCTGGCGCTGCATGTGGTGGCTGAGGCGCAGAAAACCGGCGGGACCTGTG 6947 Query 64831 CCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACC 64890 ||| |||||| || ||||| | |||| || | |||||| | ||||| || || Sbjct 6948 CCTTCATCGATGCCGAGCATGCGATGGATCCGGTTTACGCCGCGAAACTCGGCGTCAACG 7007 Query 64891 TCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACC 64950 |||| | | |||| |||||| || | |||||||||||||||||||||| |||| Sbjct 7008 TCGAAGAATTGCTGGTTTCTCAGCCCGATGCCGGCGAGCAGGCCCTGGAGATCGCTGACA 7067 Query 64951 TCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGC 65010 || || || |||| | | | | | ||||| || || |||||||| |||||| Sbjct 7068 CTCTGGTGCGCTCCGGCGCGGTCGACGTTCTGGTCGTCGATTCGGTGGCGGCTTTGGTGC 7127 Query 65011 CGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCA 65070 || | |||||||| ||||| ||||| || || | | ||| ||||| |||||||| | Sbjct 7128 CGAGGGCCGAGCTGGAAGGTGACATGGGCGATTCGCTCCCCGGGCTGCAAGCGCGCCTGA 7187 Query 65071 TGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCT 65130 || |||||| |||||||| | ||| || | ||||||| | | || ||| ||| Sbjct 7188 TGAGCCAGGCCCTGCGCAAGTTGACCAGCTCGATCTCCAAATCTCAGACTCTGGTAGTCT 7247 Query 65131 GGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGC---CCGAATGAGACCA 65187 |||||||| | || ||||||||| ||| | |||| ||| ||||||| Sbjct 7248 TCATCAACCAGATCCGTATGAAGATCGG---TGTGATGTTCGGCAATCCG---GAGACCA 7301 Query 65188 CCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCG 65247 | || ||||| | || ||| ||| || |||| || ||| | ||| |||| ||||||| Sbjct 7302 CGACCGGCGGTCATGCGCTGAAGTTTTATTCCTCGGTGCGCCTCGATATCCGGCGCATCG 7361 Query 65248 CCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGA 65307 | ||||| || || |||||||||| |||||||| ||||| || || | Sbjct 7362 GTGCGATTAAGGACAAGGACCTGGTGGTCGGCAACCAGACCCGGGTCAAGGTGGTGAAAA 7421 Query 65308 ACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCT 65367 ||||| |||| |||||| ||| || |||||| | || || || ||||| |||| Sbjct 7422 ACAAGATGGCGCCGCCGTTCCGGGTCGTGGAGTTCGACATCACCTATGGTGAGGGAATCT 7481 Query 65368 -CGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAG---GGCCTGGTGAAGAAGTCG 65423 | | |||| || || ||||| || | | ||| ||| || | ||| | ||| | Sbjct 7482 CCAAGACAGGT-GAGCTTCTCGATCTTG--GGGTC-CAGGCCGGTATCGTGGATAAGGCC 7537 Query 65424 GGCGCCTGGTTC 65435 |||||||||||| Sbjct 7538 GGCGCCTGGTTC 7549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236922874384390