Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq2293 159 1e-34 seq11659 96.9 1e-15 seq538 86.0 2e-12 >seq2293 Length=89781 Score = 159 bits (176), Expect = 1e-34 Identities = 241/343 (70%), Gaps = 0/343 (0%) Strand=Plus/Minus Query 37170 GGTTACCCGCAAAGGTGCTGTTCGGGCCCGCGAGGGCGACCTGGGCATCATCCCTGGCTC 37229 ||| || ||||| || || || || || || || ||| |||| |||||||| ||||| Sbjct 22203 GGTGACGCGCAAGGGCGCAGTGCGTGCGGGCCGGGACGAGTTGGGGATCATCCCCGGCTC 22144 Query 37230 GATGGGTGCGAAGTCATTCATCGTTCGCGGCAAGGGAAATTCCGAATCGTTCTGCTCTTG 37289 ||||| ||| || | |||||| || || || || |||| || ||| || || Sbjct 22143 CATGGGCGCGCGCTCCTACATCGTCCGTGGGCTCGGCAACGCCGAGTCCTTCCAGTCCTG 22084 Query 37290 CAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAAGCAAAACGCCGGTTCACAGTCGA 37349 | |||||| || || || | ||||||||| | || || || ||||| ||||| | | Sbjct 22083 CTCCCACGGGGCGGGGCGCAGCATGAGCCGGTCTGAGGCGAAGCGCCGCTTCACCTTGGC 22024 Query 37350 GGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGCAAAGATGCCGAAGTGATCGACGA 37409 || || || |||||| | || |||| |||||||| || | || |||||||| Sbjct 22023 CGACCACATCGCCGCCACCGAGGGCGTCGAATGCCGCAAGGACCAGGGGGTCATCGACGA 21964 Query 37410 GACGCCAGCGGCTTACAAGGACATCGATGCGGTCATGGCCGCGCAATCCGCCCTGGTGGA 37469 ||| || ||||| |||||||| ||||| || ||||||||||| || || |||||||| Sbjct 21963 GACCCCCGCGGCCTACAAGGATATCGACGCCGTCATGGCCGCCCAGCGCGACCTGGTGGC 21904 Query 37470 CATCGTGCACACGCTGCGCCAAGTCGTTTGCGTGAAGGGTTGA 37512 | | ||||| ||| || || || |||||||| || ||| Sbjct 21903 GGTGGAACACACCCTGAAGCAGGTGGTCTGCGTGAAAGGGTGA 21861 >seq11659 Length=22639 Score = 96.9 bits (106), Expect = 1e-15 Identities = 59/63 (94%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 21072 CGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATCCAGCTGAGCT 21131 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 17042 CGACAGGATTCGAACCTGTGACCGTCTGCTTAGAAGGCAGATGCTCTATCCAGCTGAGCT 16983 Query 21132 ACG 21134 ||| Sbjct 16982 ACG 16980 >seq538 Length=13105 Score = 86.0 bits (94), Expect = 2e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 21058 AGTGATGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTC 21117 ||| |||||| ||||||||||||||||||||||||| | ||| | ||| | |||| Sbjct 2116 AGTCATGGCGGACCCGACAGGATTCGAACCTGTGACCTCTGCCTTCGGAGGGCAGCGCTC 2175 Query 21118 TATCCAGCTGAGCTACGGGGCC 21139 ||||||||||||||||||| || Sbjct 2176 TATCCAGCTGAGCTACGGGTCC 2197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139040576500280