Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq27829 84.2 6e-12 >seq27829 Length=4891 Score = 84.2 bits (92), Expect = 6e-12 Identities = 197/294 (67%), Gaps = 5/294 (2%) Strand=Plus/Minus Query 30097 CTCTGTTGTGTAGCGGTCCTGACCGTCCTGCGCCTGCCACTTTCGAGTTCTGAGTGAACC 30156 ||| || | |||||| ||||||||| || | ||| || || || ||| || Sbjct 601 CTCGGTGGAGTAGCGTTCCTGACCGCTTTGGTCGGTCCATTTGCGGGTCTGGAGCTGGCC 542 Query 30157 CTCGACGTACAGTTGCTGACCCTTCTTTACGTGCTGCCCGACGA--TC--TCCGCCAACT 30212 ||||| ||| || | ||||||||| || | | || ||| || || || ||| || Sbjct 541 CTCGAGGTAGAGCTTGGCACCCTTCTTCACATACCGCTCGATGACGTCGATCAGCCG-CT 483 Query 30213 TCCCGAAGAACACCACGCGGTGCCATTCGGTGCGCTCCTGTTGCTGGCCGGTCTGCTTGT 30272 |||||| || || |||||||||||||| ||| | | | |||||||| || Sbjct 482 CGTCGAAGACGACGACTCGGTGCCATTCGGTCTTCTCGCGCCGTTCTCCGGTCTGACGGT 423 Query 30273 CCTTCCAGCTCTCGCTGGTGGCGAGGGTGATGTTGGTCACCGCATTGCCGTTGGGCATAT 30332 | |||| ||||||||||||||| || || ||| | ||| | |||||| ||| Sbjct 422 CGCGCCAGTTCTCGCTGGTGGCGACGGAGAGGTTCGCGACCTTACCGCCGTTTTGCAGGG 363 Query 30333 AGCGAGTTTCCGGGTCACCACCGACGTTGCCAACCAGAATGACTTTGTTAACGC 30386 |||| || || || | || | || || ||||||||||| ||||| |||| Sbjct 362 AGCGGACCTCGGGATCCCGCCCCAGATTACCGACCAGAATGACCTTGTTGACGC 309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145384706099360