Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq13327 408 5e-109 seq303 389 4e-103 seq11659 87.8 2e-12 >seq13327 Length=3816 Score = 408 bits (452), Expect = 5e-109 Identities = 662/950 (70%), Gaps = 2/950 (0%) Strand=Plus/Minus Query 157080 CCGTTTGTATGTTGGTTGGTTCGGTGTGCTTATGATTCCAACATTGCTTGCAGCAACTAT 157139 |||| | ||| | || ||||| || | | ||| | ||||| || | |||| ||| Sbjct 2796 CCGTCTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGCAG-TAT 2738 Query 157140 C-TGCTTCATTGTTGCATTCGTAGCAGCACCTCCCGTTGATATCGACGGTATTCGCGAAC 157198 | || ||||||| ||| || ||||| ||||| || || ||||| || || ||||| || | Sbjct 2737 CGTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGC 2678 Query 157199 CAGTTGCTGGTTCTCTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCTTCTT 157258 ||||| | || ||||| | || || || || || ||||| || || || || || || Sbjct 2677 CAGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTT 2618 Query 157259 CAAACGCAATCGGTCTTCACTTCTACCCCATCTGGGAAGCAGCATCACTTGATGAGTGGC 157318 |||| || || ||| | || || || | | || || || | |||| || || Sbjct 2617 CAAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGAT 2558 Query 157319 TTTACAACGGTGGTCCTTTCCAACTGGTAGTCTTTCACTTCCTGATCGGCATCTATGCCT 157378 | || ||||| || |||| |||| | || || | || ||| | ||||| | | | Sbjct 2557 TGTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCAT 2498 Query 157379 ATATGGGACGTGAGTGGGAACTTTCTTACCGTTTAGGTATGCGCCCCTGGATCTGTGTTG 157438 || | || |||||||| ||| | |||||||||||| ||||| || || || | || | Sbjct 2497 ATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAG 2438 Query 157439 CCTACTCGGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAG 157498 | | ||| |||||||| || || || || ||||| || || || || |||| |||| Sbjct 2437 CTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAG 2378 Query 157499 GTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTCGTCT 157558 | ||||| || |||| |||||||| || || ||||| || || |||| ||||| || | Sbjct 2377 GATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTAT 2318 Query 157559 TCCAGGCAGAGCACAATATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTAT 157618 ||||||||||||| ||||| | ||||| || ||||||||| || || || || |||| Sbjct 2317 TCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTAT 2258 Query 157619 TCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTTGTTCGTG 157678 | || |||||||| || ||||||||| ||| | | ||||| || | | || | Sbjct 2257 TTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTA 2198 Query 157679 AAACAACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACGT 157738 || | |||| || |||| || ||||| || || ||||| || ||| | || || | Sbjct 2197 TGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACAT 2138 Query 157739 ACAACATCGTTGCTGCACACGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCATTCA 157798 | || ||||| || || ||||| |||||||| || || ||||| |||| ||| || | Sbjct 2137 ATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTA 2078 Query 157799 ACAACAGCAGAAGTCTTCACTTCTTCCTCGCCGCATGGCCTGTTGTCGGCATCTGGTTCA 157858 | ||| | | | ||||||||||| || || || || || || ||||| || | Sbjct 2077 ATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAA 2018 Query 157859 CTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCA 157918 | ||| |||| | || || ||||| ||||| || || || ||||| |||||||| || | Sbjct 2017 CAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAA 1958 Query 157919 TCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTCCTGAACCGCGCTGGTC 157978 || |||||| | || ||||| | | || || ||| || | || || || || Sbjct 1957 TCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATC 1898 Query 157979 TTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTGGAT 158028 | || |||||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct 1897 TAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGAT 1848 >seq303 Length=42796 Score = 389 bits (430), Expect = 4e-103 Identities = 664/958 (69%), Gaps = 4/958 (0%) Strand=Plus/Minus Query 158817 TTTGTTGGCTGGTCTGGACTTCTTCTTCTACCCACTGCTTATCTTGCTATTGGCGGTTGG 158876 ||||||||||| || ||| | | ||| | || || |||||| | || | || || || Sbjct 27668 TTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGAGGATGA 27609 Query 158877 CTTACTGGCACGACTTTCGCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTT 158936 || || || ||||||| || || |||||| | ||||| || || || |||||| Sbjct 27608 TTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGCTATCTA 27549 Query 158937 GAGGGTGCAAACTTTCTTACAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCT 158996 || ||| || ||| | || || || || || || || ||| || ||||| || || Sbjct 27548 GAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGGCACTCG 27489 Query 158997 CTTCTGCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGGTCCAACTTGGG 159056 ||| | | | || ||||| || ||||| || ||| | ||| ||| |||| Sbjct 27488 CTTTTATTACCTTGAGGTCCCGAAGCTCAGGGACTTTTAACTCGATGGTATCAAGTTGGA 27429 Query 159057 GGACTCTGGAATTTTGTGGCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTC-G 159115 || | || |||||| | || | || || |||| | | || || || || | Sbjct 27428 GGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTT-TGTTTAAG 27370 Query 159116 CCAGTTTGAACTGGCACGTCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGG 159175 || |||||| | ||| | | | | ||||| || ||||| ||||| ||| | || Sbjct 27369 ACAATTTGAAATTGCAAGGTTAGTGCAGGTTCGTCCATATAATGCAATTGCTTTCACCGG 27310 Query 159176 TCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTT 159235 ||| ||||| |||||||| ||||| | || || || | ||||| | ||||| || Sbjct 27309 TCCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGAGTTGATT 27250 Query 159236 TTTCGCTCCGTCCTTTGGGGTGGCCGCAATATTCAGGTTCCTACTCTTCCTACAAGGGTT 159295 ||| || || ||||| ||||| || || || || || |||| ||| | |||||||| Sbjct 27249 TTTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTTCAAGGGTT 27190 Query 159296 CCACAATTGGACACTAAACCCCTTCCATATGATGGGAGTTGCTGGTATCCTAGGTGGAGC 159355 || || || ||||| || || |||||||||||||| || || ||||| |||| || || Sbjct 27189 TCATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTAGGAGGTGC 27130 Query 159356 ACTTCTATCTGCTATTCATGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACA 159415 | | ||||| || ||||| | || || ||||||| ||||| | ||||| | Sbjct 27129 GTTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAAGATGGTGTGTC 27070 Query 159416 AGCAAACACCTTTAAGGCGTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGTCAC 159475 |||||||| || ||| |||| ||| || ||||||||||| ||||| || Sbjct 27069 GTATGACACCTTTCGTGCTTTTAGCCCAACGCAATTAGAAGAGACTTATTCAATGGTAAC 27010 Query 159476 TGCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCA 159535 ||||| || || || || ||||| || || | || |||||||||||||| ||| | || Sbjct 27009 CGCAAATCGTTTTTGATCTCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGTTGGTTACA 26950 Query 159536 TTTCTTTATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCAGTATTGGCATTATTGG 159595 |||||||||||| || || || || | || |||| || || | |||| || |||| Sbjct 26949 TTTCTTTATGTTATTCGTACCGGTAACTGGCTTATGAACTTCTGCTTTTGGGATGGTTGG 26890 Query 159596 TCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGA 159655 ||| || | ||| | | || |||||||| ||| ||||||| | ||||||| ||||| Sbjct 26889 TCTGGCCTTAAATTTAAGGGCATACGATTTTGTGTCTCAAGAGTTACGAGCAGCCGAAGA 26830 Query 159656 TCCAGAATTTGAAACGTTCTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGCTTG 159715 ||| ||||| |||||||| || ||||| || || | || ||||||||| | |||||||| Sbjct 26829 TCCTGAATTCGAAACGTTTTATACCAAAAATATATTGCTTAATGAAGGAATCCGTGCTTG 26770 Query 159716 GTTGGCACCTGC-TGATCAACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTACC 159772 |||| ||| || ||||| |||||||| ||||| |||||||| |||||| |||| Sbjct 26769 AATGGC-TATGCAGGACCAACCTCATGAAAATTTCATTTTCCCAGAGGAAGTTTTACC 26713 >seq11659 Length=22639 Score = 87.8 bits (96), Expect = 2e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 154520 GTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGCCACAGGTTCGAGTCCTGT 154579 ||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||| |||||| Sbjct 16981 GTAGCTCAGCTGGATAGAGCATCTGCCTTCTAAGCAGACGGTCACAGGTTCGAATCCTGT 17040 Query 154580 C 154580 | Sbjct 17041 C 17041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544273772695200