Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq13327 443 2e-119 seq303 410 1e-109 seq4451 107 2e-18 >seq13327 Length=3816 Score = 443 bits (490), Expect = 2e-119 Identities = 671/951 (71%), Gaps = 3/951 (0%) Strand=Plus/Minus Query 177587 CCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTAT 177646 ||| || ||| |||| ||||| || || | ||| | ||||| | || |||| ||| Sbjct 2796 CCGTCTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGCAG-TAT 2738 Query 177647 C-TGCTTCATCGTCGCCTTCGTCGCTGCTCCCCCCGTGGACATCGACGGCATCCGTGAAC 177705 | || ||||| | || || || || || || || || || || || || || ||||| | Sbjct 2737 CGTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGC 2678 Query 177706 CCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTT 177765 | || | || || || | || || || || || ||||| || || || ||||| || Sbjct 2677 CAGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTT 2618 Query 177766 CCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGC 177825 | || || |||||| | || || ||| | | || || || | |||| || || Sbjct 2617 CAAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGAT 2558 Query 177826 TGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGCAT 177885 |||||||||| || |||| |||| |||| || | || ||| | ||||| | ||| Sbjct 2557 TGTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCAT 2498 Query 177886 ATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTATGCGCCCCTGGATCTGTGTTG 177945 || | || |||||||| ||| | |||||| |||| ||||| || || || | || | Sbjct 2497 ATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAG 2438 Query 177946 CATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTAGTCTATCCTTTCGGTCAAG 178005 | | ||||||||| |||||||||||||| || || |||||||| || || |||| |||| Sbjct 2437 CTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAG 2378 Query 178006 GTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTAT 178065 | || || || |||| |||||||| || || ||||| || || |||| |||||| |||| Sbjct 2377 GATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTAT 2318 Query 178066 TCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGGTAT 178125 |||| ||||| || |||||| | |||||||| ||||||||| || || || || |||| Sbjct 2317 TCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTAT 2258 Query 178126 TCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCCGTG 178185 | || |||||| | || ||||||||||||| | | ||||| || | | | | Sbjct 2257 TTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTA 2198 Query 178186 AGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACAT 178245 ||| | ||| ||| || | || ||||| || || |||||||| ||| | ||||||| Sbjct 2197 TGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACAT 2138 Query 178246 ATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCGTTCA 178305 |||| ||||| || || || || |||||||| ||| | ||||| |||| ||| || | Sbjct 2137 ATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTA 2078 Query 178306 ACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCA 178365 | ||||| ||||| | ||||||||||| ||| || || |||||||||||||| || | Sbjct 2077 ATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAA 2018 Query 178366 CCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCCA 178425 | ||| | || | || ||||| || || || ||||||||||| |||||||| || | Sbjct 2017 CAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAA 1958 Query 178426 TCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGGTC 178485 || | || | | |||||||||| | | || || || | | || ||||| || Sbjct 1957 TCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATC 1898 Query 178486 TCGGCATGGAAGTCATGCACGAAAGAAATAGCACATAACTTCCCGCTTGAT 178536 | || |||||||| ||||| || | || || || || ||||| || ||| Sbjct 1897 TAGGAATGGAAGTAATGCATGAGCGTAA-CGCGCACAATTTCCCTCTAGAT 1848 >seq303 Length=42796 Score = 410 bits (454), Expect = 1e-109 Identities = 703/1015 (69%), Gaps = 4/1015 (0%) Strand=Plus/Minus Query 178939 TTCGATGTCTTGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 178998 || ||| | ||||| || | | || | ||| | ||| | ||||| || || || ||| Sbjct 27710 TTTGATTTATTGGACGATTTTATAAAGCAGGAAAGATTTATATTTGTTGGCTGATCCGGA 27651 Query 178999 CTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTT 179058 | | ||| |||| || |||||| | || | || || || || || || |||| Sbjct 27650 TTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGAGGATGATTTGTGGGTACTACTTTC 27591 Query 179059 GTTACGAGTTGGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTT 179118 || || |||||||| | |||||||| || | |||||| |||||| ||| ||| | Sbjct 27590 GTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGCTATCTAGAAGGTTGTAATTTTTTA 27531 Query 179119 ACGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 179178 || || ||||| || ||||| ||| || ||||| || || ||| | ||| ||| ||| Sbjct 27530 ACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGGCACTCGCTTTTATTACCTTGAGGT 27471 Query 179179 CCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTG 179238 || || ||||||| ||| || |||| ||| |||| || |||| ||||| | Sbjct 27470 CCCGAAGCTCAGGGACTTTTAACTCGATGGTATCAAGTTGGAGGTTTATGAAATTTTATC 27411 Query 179239 GCTCTCCACGGTGCCTTCGCCCTAATTGGATTCATGCTTC-GTCAGTTTGAACTGGCACG 179297 || | || || |||| | | ||||| || || | || |||||| | ||| | Sbjct 27410 GCCTTTCATGGGACCTTAGGGTTGGCAGGATTT-TGTTTAAGACAATTTGAAATTGCAAG 27352 Query 179298 TCTCATCGGTATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGT 179357 | | | ||||| || ||||| |||||||| || ||||| ||||| || || || Sbjct 27351 GTTAGTGCAGGTTCGTCCATATAATGCAATTGCTTTCACCGGTCCAATTGCAGTTTTTGT 27292 Query 179358 TAGTGTATTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGG 179417 ||| ||| | || || || | || ||| | ||||| || ||||| ||| ||||| Sbjct 27291 ATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGAGTTGATTTTTTGCACCAAGTTTTGG 27232 Query 179418 TGTTGCGGCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAA 179477 || || || || |||||||| |||| ||||| ||||| || || ||||| ||||| || Sbjct 27231 AGTGGCTGCCATTTTTAGATTTTTACTATTCTTTCAAGGGTTTCATAACTGAACACTGAA 27172 Query 179478 CCCCTTTCACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCA 179537 || || || |||||||| || |||||||| | || ||||| | | ||||| || || Sbjct 27171 TCCTTTCCATATGATGGGTGTCGCAGGTATTTTAGGAGGTGCGTTATTGTCTGCCATCCA 27112 Query 179538 TGGAGTAACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGC 179597 ||||| |||||| | ||||| || ||| ||||||| | |||| ||| || Sbjct 27111 TGGAGCGACTGTACAAAATACCTTATATAAAGATGGTGTGTCGTATGACACCTTTCGTGC 27052 Query 179598 GTTCGACTCTACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTC 179657 || | | |||||| || ||||| ||||| ||||| || || || |||||||| || Sbjct 27051 TTTTAGCCCAACGCAATTAGAAGAGACTTATTCAATGGTAACCGCAAATCGTTTTTGATC 26992 Query 179658 GCAGATCTTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGT 179717 ||||| || || || | ||| || ||||||||||| || ||||||| | | || || Sbjct 26991 TCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGTTGGTTACATTTCTTTATGTTATTCGT 26932 Query 179718 TCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCG 179777 || || | || | || ||| || |||| || |||| || || | ||| | | Sbjct 26931 ACCGGTAACTGGCTTATGAACTTCTGCTTTTGGGATGGTTGGTCTGGCCTTAAATTTAAG 26872 Query 179778 TGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTT 179837 || || ||||||||| ||||||| | ||||||| ||||||||||| ||||| ||||| Sbjct 26871 GGCATACGATTTTGTGTCTCAAGAGTTACGAGCAGCCGAAGATCCTGAATTCGAAACGTT 26812 Query 179838 CTATACAAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGC-TGATC 179896 ||||| || || || | || ||||||||| | |||||||| |||| ||| || | Sbjct 26811 TTATACCAAAAATATATTGCTTAATGAAGGAATCCGTGCTTGAATGGC-TATGCAGGACC 26753 Query 179897 AACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 |||| |||||||| ||||| |||||||| ||||| ||||| | || || || || Sbjct 26752 AACCTCATGAAAATTTCATTTTCCCAGAGGAAGTTTTACCTCGCGGAAATGCTCT 26698 >seq4451 Length=5298 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 138528 TGATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTG 138587 |||||| |||||| | || ||||||||||| || || || ||||| || ||||| ||||| Sbjct 2275 TGATGACCAGTACGTTCTGGATGCTGCTGAGGAGGCCGGAATTGACCTCCCCTATTCCTG 2216 Query 138588 TCGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTC 138647 || ||||| | || || ||||| || || || | || ||| |||| || | || Sbjct 2215 CCGCGCTGGCTCCTGCTCCACCTGCGCCGGCAAGGTTGTCTCCGGATCTGTTGACAACTC 2156 Query 138648 TGACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGC 138707 ||| ||| | ||||| ||||| ||| | | || || || | | | || ||||| || Sbjct 2155 TGAGCAGACCTTCCTCGATGACAGCCAGCTCGGTGCTGGCTTCACCCTCACATGCGTGGC 2096 Query 138708 ATACCCCACATCCGATTGTATAAT 138731 |||||||| ||||| || | ||| Sbjct 2095 TTACCCCACCTCCGACTGCACAAT 2072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 604556633480400