Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq49863 84.2 2e-11 >seq49863 Length=10164 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/233 (68%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 26495 CCAATAAAGTTCTCACCAATAATAAACGCTTCTGCTAAACCTTTTGG-----GCTATCCT 26549 |||||||| ||||| ||||||||||| |||| ||| | ||| | || | | | | Sbjct 6163 CCAATAAATTTCTCCCCAATAATAAAGGCTTGTGCCAGACCATCCGGTGAGGGTTGTTCC 6104 Query 26550 GTATTGCATA-CTGTAGGGAAATACCAAAAGAAGAACCATCACCTAGAAGATTTACAAAA 26608 | || | | | ||||||| |||| || |||||||||||||| |||| | ||| Sbjct 6103 GCATAGGAAAACTGTAGG------CCAATAGCCGAACCATCACCTAGGAGATGTCTGAAA 6050 Query 26609 TTAATTTGATCTTCTGGTGTTGTAATTATTAGTATTTCCCTAATTCCAGAAAGCATTAGG 26668 ||| | || || | ||| || | ||||||| || || | | ||||| Sbjct 6049 CGGGGCAAATCCACGGGGGTAGAAATAATCAAAATTTCCCGTATGCCGGCCAACATTAAA 5990 Query 26669 ACAGAGAGTGGATAATAAATCATAGGTTTATCGTAAATTGGTAATAGTTGTTT 26721 | || || |||||||||||||| ||||| || | |||||| ||||| ||||| Sbjct 5989 GCGGACAGAGGATAATAAATCATGGGTTTGTCATGAATTGGCAATAGCTGTTT 5937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474558638932800