Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq25272 113 1e-19 seq144465 87.8 6e-12 >seq25272 Length=34676 Score = 113 bits (124), Expect = 1e-19 Identities = 302/459 (66%), Gaps = 2/459 (0%) Strand=Plus/Minus Query 188733 AAATGATGATGGAGTAAAGAT-CAAAAAATCTAATGTTCTTTTAGTTGGCCCTACTGGTT 188791 ||| || || | | || |||| ||||||| | || | || | || || | || || Sbjct 1832 AAAAGAGGACGAAATAGAGATACAAAAAAGC-AACATCATTATGGTGGGGCAAACGGGAA 1774 Query 188792 CAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATGTACCTCTAGCTATCT 188851 |||| || |||||| | || |||| | || | ||| | |||| ||| | || || Sbjct 1773 CAGGAAAGACATTAATGGCCAAAACCATTGCAAAGATGCTCAATGTTCCTTTGGCCATAG 1714 Query 188852 CTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGC 188911 ||||| || ||| || || || |||||||| || || |||||||| | | || | Sbjct 1713 TGGATGCCACCGTTTTGACCGAGGCAGGTTATGTGGGCGAGGATGTGGAGAGCATACTTA 1654 Query 188912 TTCGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATA 188971 ||| | | ||||| || ||||| | | ||| | | ||||| || || || | || Sbjct 1653 CACGTCTTTTACAAGCGGCCGATTATAACTTGGAAAAAACAGAACGGGGTATCGTTTTTA 1594 Query 188972 TCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTAT 189031 | |||||| | |||||||| || | || || | | | ||||| ||| | || || | Sbjct 1593 TAGATGAAATCGATAAAATAGCCCGTAAGAGTGATAACCCCTCCATAACCAGGGACGTTT 1534 Query 189032 CTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTC 189091 | || ||||| ||||| |||| | |||| | | ||||| || || | || || | Sbjct 1533 CCGGTGAAGGTGTACAACAAGGACTTCTAAAGCTTTTGGAAGGGACGGTGGTAAACGTAC 1474 Query 189092 CTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAATAGATACAACTAATA 189151 | || |||| ||| | |||||||| | ||| || | |||| || | || || | Sbjct 1473 CACCCAAAGGAGGTAGAAAACACCCCGATCAAAAATTCATTGAGGTAAACACGGAGAACA 1414 Query 189152 TCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAA 189190 ||||||||||| || || || || ||||| | |||| Sbjct 1413 TCTTGTTTATTGCGGGAGGTGCTTTCGATGGAATCGAAA 1375 >seq144465 Length=2461 Score = 87.8 bits (96), Expect = 6e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 411232 ATGGTGGTTGTAGCTCAATTGGTTAGAGCGCTAGATTGTGGATCTAGAGGTTGTGGGTTC 411291 ||||||||||||||||| ||||||||||||| |||||||| || |||||| | ||||| Sbjct 514 ATGGTGGTTGTAGCTCAGCTGGTTAGAGCGCTGGATTGTGGTTCCAGAGGTCGCCGGTTC 455 Query 411292 GATCCCCATCATCCACCC 411309 || ||| || ||||||| Sbjct 454 GAACCCGGTCTTCCACCC 437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588918459125120