Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_024367.1 Length=75028 Score E Sequences producing significant alignments: (Bits) Value seq5209 196 2e-45 seq18646 190 1e-43 >seq5209 Length=31209 Score = 196 bits (216), Expect = 2e-45 Identities = 454/680 (67%), Gaps = 6/680 (1%) Strand=Plus/Minus Query 45854 GCCAGATTCACTGAACCAAGCAGACAGGCACCATACGGAGGCAGAGGCTGCTCACCACAT 45913 |||||||| | || || ||||| ||||| ||||| || ||||| ||||| || ||||| Sbjct 10270 GCCAGATTGATCGAGCCCAGCAGGCAGGCGCCATAGGGCGGCAGCGGCTGTTCGCCACAG 10211 Query 45914 GGATTCGTTGCTGCAATGGTTTCAAGGAACCAGAGATTGTTCTCCTTGTTGATGCGATCA 45973 || || || || ||||| || | | || ||||| || |||||||| || Sbjct 10210 GGGTTGGTGGCGCTGATGGTCTCGCAGTAGTGCAGGTTGTTGCGCTGATTGATGCGGTCG 10151 Query 45974 ATGAAGATCACACCGGGTTCAGCGTAGTTGTAGGTGT--TCCATAGAATCGCTTCCCAGA 46031 ||||||||||| || || || || | || |||| | ||| || | ||||||| Sbjct 10150 ATGAAGATCACGCCCGGCTCGGCAGCGGCGTGGGTGGCGTGCATG--ATGCCGTCCCAGA 10093 Query 46032 GATCCTTTGCTTTGATGGTGTCGTAGACCTTACCATCGAACATCAGATCCCAGTCAGAAT 46091 | | || | | | ||| ||| |||| ||||| | || |||| | Sbjct 10092 GCTTGCGCGCCTGTACCACCTTGTAAACCGTACCCTCGAAGCTGAGGGACCAGGGCTGGT 10033 Query 46092 CATGAGCCACCGCTTCCATGAACTCATCAGTACAGAGCACTGACACGTTGAAGTTACGAA 46151 | | | |||||| | |||||| | || | ||||| || | ||||| | || Sbjct 10032 CTTCACGCACCGCCTGCATGAAGGCGTCGCTGACCAGCACCGAAAGATTGAACATCGAAA 9973 Query 46152 GACGCAGAGGATCCTGCTTGGCTTGGACGAATTCCATGATGTCCGGATGGTCACACCGCA 46211 | ||| || ||||||||||| | || ||| | ||||||||||||||| || || Sbjct 9972 GCCGCCCCGGCTCCTGCTTGGCCTCGATGAAGACTTCGATGTCCGGATGGTCGCAGGCCA 9913 Query 46212 TGGTGGCCATCATAGCACCCCGTCGGCTGCCTGCTGACATGATGGTTTTGCACATCGAGT 46271 |||||||||||| || || || || ||| || ||||||||| |||||| | | Sbjct 9912 GGGTGGCCATCATGGCGCCGCGGCGCGAGCCGGCGCTCATGATGGTCCGGCACATGGCAT 9853 Query 46272 CCCAGACATCCATGAATGTGAGAGGACCGC-TGGAGAAGCTCTCCACGCCCTTCACAGGT 46330 |||||||||||||||| | || || ||| || | || | | | || | || | Sbjct 9852 CCCAGACATCCATGAAGGACAGCGGGCCGGATGCATCGGCGC-CGATTCCGTGGACCAGG 9794 Query 46331 GCTCCCTTCGGACGAAGGGTACTGAAGTCATAACCAATCCCACCGCCTTGCTGCATCGTG 46390 || || || || || ||||| ||||| || || || || ||||| || ||||||||| Sbjct 9793 GCCCCTTTGGGCCGCAGGGTGGAAAAGTCGTAGCCGATGCCGCCGCCCTGTTGCATCGTG 9734 Query 46391 AGAGCAGCTTCCTTGAGCATATCGAAGATACCATCAAGGCTGTCAGGGATGGTTCCCATG 46450 ||||| |||||||| || |||||||| || | | | |||||||||| | |||||| Sbjct 9733 AGAGCGGCTTCCTTCAGGTGTTCGAAGATTCCGGCCATGTCGTCAGGGATGCTGCCCATG 9674 Query 46451 ACATAGCAGTTGAACAAGGTCACGTTGCGTCCCGTACCTGCACCGGAATTAATCCGTCCT 46510 || |||||||||| | ||| || || || | | || || || | | || ||||| Sbjct 9673 ACGAAGCAGTTGAAAAGGGTGACATTCCGCTCGCTGCCGGCGCCAGCCTGGATGCGTCCG 9614 Query 46511 GCTGGTAGGAACTTGAAATC 46530 || || || ||| ||||| Sbjct 9613 GCGGGGAGAAACCGAAAATC 9594 >seq18646 Length=3619 Score = 190 bits (210), Expect = 1e-43 Identities = 468/704 (66%), Gaps = 12/704 (2%) Strand=Plus/Minus Query 45854 GCCAGATTCACTGAACCAAGCAGACAGGCACCATACGGAGGCAGAGGCTGCTCACCACAT 45913 ||||| |||| || || ||||||||||| || || || ||||| |||||||| || || Sbjct 1250 GCCAGGTTCAGCGAGCCGAGCAGACAGGCGCCGTAAGGCGGCAGCGGCTGCTCTCCGCAA 1191 Query 45914 GGATTCGTTGCTGCAATGGTTTCAAGGAA--CCAGAGATTGTTCTCCTTGTTGATGCGAT 45971 || ||||| || ||| ||| | | |||| | | || | |||||| | | Sbjct 1190 GGGTTCGTGGCGCGGATGTCTTCGCAGTAGGCCAGGGGAT--TCAGCCGGTTGATCCTGT 1133 Query 45972 CAATGAAGATCACACCGGGTTCAGCGTAGTTGTAGGTGTTCCATAGAATCGCTTCCCAGA 46031 | || ||||||||||| || || | | |||||| | | || | ||||| | Sbjct 1132 CGATAAAGATCACACCCGGCTCGCTGGTCTCGTAGGTCGCACGCATGATGCCGTCCCACA 1073 Query 46032 GATCCTTTGCTTTGATGGTGTCGTAGACCTTACCATCGAACATCAGATCCCAGTCAGAAT 46091 | || || | || ||||| || || |||| |||| |||||| | || Sbjct 1072 GCGCCCGCGCCTGCCGCGTCCCGTAGGGCTGGCCGGCGAAGGTCAGGGTCCAGTCGGCAT 1013 Query 46092 CATGAGCCACCGCTTCCATGAACTCATCAGTACAGAGCACTGACACGTTGAAGTTACGAA 46151 | | ||||| ||||||| |||| || ||||| || | |||||||| | Sbjct 1012 CGGCCTCGACCGCGGCCATGAAGGCATCGGTCACCAGCACCGAGAGATTGAAGTTGGTCA 953 Query 46152 GACGCAGAGGATCCTGCTTGGCTTGGACGAATTCCATGATGTCCGGATGGTCACACCGCA 46211 | || | ||| ||| || |||| ||| | ||| || |||||||| || |||| Sbjct 952 GCCGGCCCGCCTCCGACTTCGCCTGGATGAAGGCTTCGATATCGGGATGGTCGCAGCGCA 893 Query 46212 TGGTGGCCATCATAGCACCCCGTCGGCTGCCTGCTGACATGATGGTTTTGCACATCGAGT 46271 |||| ||||||| || || || ||| ||| || ||||||||||| |||||| | || Sbjct 892 GGGTGCCCATCATGGCGCCGCGCCGGTGGCCCGCCGACATGATGGTCCGGCACATGGCGT 833 Query 46272 CCCAGACATCCATGAATGTGAGAGGA-CCGCTGGAGAAGCTCTCCACGCCCTTCACAGGT 46330 |||| || |||||||| |||| ||| ||| | | || | | ||||||||||| Sbjct 832 CCCAAACGTCCATGAAACTGAGCGGACCCGAGGCATCCGCGC-CGACGCCCTTCACGACG 774 Query 46331 GCTCCCTTCGGACGAAGGGTACTGAAGTCATAACCAATCCCACCGCCTTGCTGCATCGTG 46390 ||||| ||| || ||||| |||||| ||||| || || ||||| ||||||| || Sbjct 773 GCTCCGCGCGGGCGCAGGGTCGAGAAGTCGTAACCGATGCCGCCGCCCTGCTGCAGGGTC 714 Query 46391 AGAGCAGCTTCCTTGAGCATAT---CGAAGATACCATCAAGGCTGTCAGGGATGGTTCCC 46447 || || || ||| ||| || |||||||||| | | | ||| || || ||| Sbjct 713 AGGGCCGCCTCC---CGCAGATGCGCGAAGATACCGCCCATGGAGTCGGGAATCTCGCCC 657 Query 46448 ATGACATAGCAGTTGAACAAGGTCACGTTGCGTCCCGTACCTGCACCGGAATTAATCCGT 46507 || || |||||||||| | || ||| ||| |||| || || |||| | |||| Sbjct 656 ATCACGAAGCAGTTGAAGAGCGTGACGGAGCGCTCCGTCCCGGCGCCGGCGATGATCCTG 597 Query 46508 CCTGCTGGTAGGAACTTGAAATCATACAGGGCTTTGAAGAACCG 46551 || ||||| |||||| || || ||| ||||| |||||| || Sbjct 596 CCCGCTGGAAGGAACCTGTGTTCCGACATGGCTTCGAAGAAGCG 553 Score = 84.2 bits (92), Expect = 1e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 45018 CGTTTGGCCGATAGGTTGTGCAACCTTTACAGCCAGTTTCAAAGGCATGGTCATAGACCG 45077 || ||||||||||||| ||||| ||||| ||||| | || |||| ||| ||||| Sbjct 2056 CGCTTGGCCGATAGGTCGTGCAGCCTTTGCAGCCTGAATCGTAGGCTTGGCGGTAGACGT 1997 Query 45078 CCTTGAAGTCTTCGAAGGAGATGTCTTCCGGAAGGTTGACAGTCTTGGA 45126 ||||||| | | |||| |||||||||||| ||||||| ||||| || Sbjct 1996 CCTTGAAAGCCTGGAAGCCGATGTCTTCCGGCAGGTTGATGGTCTTCGA 1948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 239535794680010