Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq9473 120 3e-22 seq83140 111 2e-19 seq37644 104 2e-17 seq122735 82.4 7e-11 >seq9473 Length=1265 Score = 120 bits (132), Expect = 3e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||||||||||||||| || ||| | || || |||||||| ||||| || || || ||||| Sbjct 1253 GTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGGGGAATCCCCTCCTT 1194 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||||||| ||||| | ||| | | ||| | ||||||||| |||| |||| Sbjct 1193 GTCCTGGATCTTTGCCTTGACGTTCTCGATAGAGTCAGAGGGCTCCACATCGAGAGTGAT 1134 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| ||||| || ||||| |||||||| Sbjct 1133 CGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 1098 >seq83140 Length=1468 Score = 111 bits (122), Expect = 2e-19 Identities = 312/472 (66%), Gaps = 13/472 (3%) Strand=Plus/Plus Query 148850 CTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGAT-CACGC 148908 |||||| |||| ||||||| || || || | ||| || ||| | ||||| ||| | Sbjct 976 CTCATCAGGGGATGTGTACTCGACAATTTCAGTGCAGAGGTTGGATGACTTGATGCAC-C 1034 Query 148909 CCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGC 148968 ||| ||||| ||| ||| ||| |||||||||||||| |||||||||||||| || | Sbjct 1035 CCAGGTTCTGTTGGTTGGACTTTCTGTTGCACGCGTCTTTGTACAGCATGTAGGGGGTAC 1094 Query 148969 CAGTTTCCACCTGCGTTTCC---ACTATGAACCGATGCAGGTCCTGCGCGCGCACTTGCT 149025 | || || | ||| | ||| | | |||||| ||| ||| || | ||| || Sbjct 1095 CGGTCTCAATCTGGCTCTCCAGAATTTTGAACC---ACAGCCACTGGGCCCTCACGGTCT 1151 Query 149026 GCTCGTAGCGACCCT-CCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAG 149084 | | | | ||| || |||| || |||| | ||| ||| |||| || || Sbjct 1152 TC-CTTCCCCTGCCTGTCTTCTCGAATTCCTCATACTTTCTCTCAAACTCCTCCCCCCAG 1210 Query 149085 CAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTAC 149144 || || || || ||||||| || ||||||||| | || ||| | |||||| | | | Sbjct 1211 CATTCAGACAGCCCAGGGCACTCGTTCGGGCACATCAACGTCCAGTCTCCGTCCTCCTTC 1270 Query 149145 ACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAG 149204 || || |||| ||||| || || | |||||| || | | ||| || | ||| || Sbjct 1271 ACTCGTCTCATGAACAGGTCAGGAATCCAGAGACCGAAGAAGAGATCCCTCGCTCTGTGC 1330 Query 149205 TCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGC 149264 || || ||| ||| |||| | || | | | | ||| | |||||| ||| Sbjct 1331 TCCTCCTTGCCGTGGTTCTTCCGCAAATCCAGGAAGTCAAGGAGGTCTGAGTGCCAGGGC 1390 Query 149265 TCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCGCCCTGGTCGACGT 149313 || | ||| | |||| | ||||||||| ||| || || |||||||||| Sbjct 1391 TCCAGGTAGATGGCGAAGGAGCCCTTGCGTTTGCCTCCTCCTTGGTCGACGT 1442 >seq37644 Length=6317 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||||| || |||| |||||||| ||| | || | ||||| || |||||||| Sbjct 4529 GGTGGATTCCTTCTCAATATTGTAGTCGGAGAGAGTTCGCCCATCCTCAAGTTGCTTGCC 4470 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || | |||||| || || ||| | ||||| ||||| ||| |||| ||| Sbjct 4469 TGCGAAGATAAGTCTCTGCTGATCAGGCGGGGTCCCTTCTTTGTCT-TGAATTTTTTCTT 4411 Query 133583 GAGCTGCT-CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | ||| ||| | ||||| || || || || | ||||| || || |||||||||| Sbjct 4410 TCACCGCTTCAATTGAGTCGGAAGGTTCAACATCTAAAGTGACCGTCTTCCCGGTCAGAG 4351 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||||||| |||||||||| Sbjct 4350 TTTTTACGTAAATCTGCAT 4332 >seq122735 Length=1630 Score = 82.4 bits (90), Expect = 7e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| | ||| | ||||| ||| | ||| | ||||||||||||||| || Sbjct 384 GTGGACTCATCCTGAACGTTGTAGTCGGAGAGCGTACATCCGTCCTCGAGCTGCTTTCCT 325 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || |||| | ||||||| || || ||||| || ||||| | | |||||| ||| Sbjct 324 GCAAAAATCAAACGCTGCTCATCTGGTGGGATCCCCTCCTTTGCCTTAATCTTTGCCTTC 265 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 | || ||| || | ||| | || | ||| || | |||||||||||||| Sbjct 264 AACTTCTCGACAGAGTCTGAGGACCGCACCTCAAGAGTGACGGTTTTGCC 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482534387535600