Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq13327 356 7e-94 >seq13327 Length=3816 Score = 356 bits (394), Expect = 7e-94 Identities = 611/887 (69%), Gaps = 0/887 (0%) Strand=Plus/Minus Query 19595 TGCTTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGAACCC 19654 || |||||| ||| || | || || || ||||| || |||||||| || || || || Sbjct 2735 TGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGCCA 2676 Query 19655 GTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAGCAGC 19714 || || || ||||| || ||||| || || || || |||||||| || ||||| Sbjct 2675 GTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTTCA 2616 Query 19715 AATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTC 19774 ||||| || || | || || || | | || || || | | |||| ||||| | Sbjct 2615 AATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGATTG 2556 Query 19775 TACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTATGCTTAC 19834 || ||||| ||||| | |||| | || || | || ||| | || || | | || Sbjct 2555 TATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCATAT 2496 Query 19835 ATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCC 19894 | || || ||||| ||| | || || || |||||||| | ||||| |||| || || Sbjct 2495 CTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAGCT 2436 Query 19895 TACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCGTCTACCCGTTTGGTCAGGGT 19954 | |||||| || |||||||| || || || || ||||| || ||||| | || || || Sbjct 2435 TTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAGGA 2376 Query 19955 AGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTC 20014 || || |||| |||||| | || || || || || ||||||| |||| | |||||| Sbjct 2375 TCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTATTC 2316 Query 20015 CAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTC 20074 || || || ||||| || | |||||||| ||||||||| ||| ||||| || ||||| Sbjct 2315 CAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTATTT 2256 Query 20075 GGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTGAG 20134 || || || |||| ||||| ||||| || || | ||||| || | | | | | Sbjct 2255 GGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTATG 2196 Query 20135 ACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTAT 20194 |||| |||| | ||| | || ||||| || || || || || ||| | || || ||| Sbjct 2195 ACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACATAT 2136 Query 20195 AACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAAC 20254 || ||||||||||| || || ||||| || ||| | ||||| |||| ||| ||| || Sbjct 2135 AATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTAAT 2076 Query 20255 AATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCT 20314 || |||||| |||||||||||||||| || ||||| || || || || || | Sbjct 2075 AACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAACA 2016 Query 20315 GCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTT 20374 || |||| || ||| ||||| || ||||| || || ||||| || ||||| || | Sbjct 2015 GCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAATC 1956 Query 20375 CTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTC 20434 | || | || ||||| ||| | ||| || || || | |||||||| ||||| Sbjct 1955 ATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATCTA 1896 Query 20435 GGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGA 20481 || | || || |||||||| || || || || || ||||| || || Sbjct 1895 GGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGA 1849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148569548602020