Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq13327 363 4e-96 >seq13327 Length=3816 Score = 363 bits (402), Expect = 4e-96 Identities = 662/967 (68%), Gaps = 8/967 (1%) Strand=Plus/Minus Query 18744 TACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTCC---GTGTCTCCT 18800 |||||| |||||| |||||||| ||||||||| | | ||| | || || | | Sbjct 2805 TACAGACCGCCGTCTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATT 2746 Query 18801 TGCAGCTACTATT-TGTTTCATTATTGCCTTCATTGCTGCACCTCCTGTAGACATTGATG 18859 |||| ||| ||||||||| ||| || | || ||||| || ||||| ||||||| Sbjct 2745 AGCAG----TATCGTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATG 2690 Query 18860 GCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAGCCG 18919 | || || ||||| ||| ||||| |||||| || ||||| || || || || ||||||| Sbjct 2689 GAATTCGTGAGCCAGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCG 2630 Query 18920 TCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCAC 18979 | || ||||| ||||| || || | || || || | | || || || | | Sbjct 2629 TAGTACCGAGTTCAAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTA 2570 Query 18980 TTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTG 19039 |||| ||||| | || ||||| ||||| | |||| | || || | || ||| | || | Sbjct 2569 TTGAGGAATGATTGTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCG 2510 Query 19040 GCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTT 19099 | || | || | || || ||||| ||| | || || || |||| ||||| |||| Sbjct 2509 GGGTAGCATCATATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTT 2450 Query 19100 GGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATC 19159 | |||| || || | ||| || || ||||| ||||| || || || || || || || | Sbjct 2449 GAATTTTCGTAGCTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACC 2390 Query 19160 CATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACT 19219 || | || ||||| || ||| || | |||||| | || ||| ||| || ||||||| Sbjct 2389 CAATCGGACAAGGATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACT 2330 Query 19220 ACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTG 19279 |||||| ||||||||||| || ||||| ||| | |||||||| ||||||||| || | Sbjct 2329 TCATGCTAGTATTCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAG 2270 Query 19280 TCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCT 19339 | || || || || || || || |||||||||| ||||| || || | ||||| || Sbjct 2269 TGGCAGGAGTATTTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAA 2210 Query 19340 CGCTTGTGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAG 19399 | | | | |||| |||||| | ||| | || ||||| || || || || || | Sbjct 2209 CTTTAATTTCTATGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGG 2150 Query 19400 AAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGT 19459 || | || || ||||| || || || || || || || || || || || || || || | Sbjct 2149 AATATGAAACATATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAAT 2090 Query 19460 ACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTG 19519 |||| || || || |||||| |||| ||||| | || ||| || || |||| Sbjct 2089 TCGCAAGTTTTAATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTG 2030 Query 19520 GCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACT 19579 | || || || | || | || | || || ||||| ||||| | ||||| || || | Sbjct 2029 GAATCTGATTAACAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATT 1970 Query 19580 TTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCA 19639 | ||||| || | |||| | || ||||| ||| | ||| || || || | | Sbjct 1969 TCAACCAATCAATCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAA 1910 Query 19640 ATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTG 19699 ||||||| || || || | || |||||||| || ||||| || || || ||||| || | Sbjct 1909 ATCGTGCAAATCTAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAG 1850 Query 19700 ATTTGGC 19706 |||| || Sbjct 1849 ATTTAGC 1843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140902926730020