Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_026584.1 Length=109871 Score E Sequences producing significant alignments: (Bits) Value seq19149 111 1e-19 seq43861 104 2e-17 >seq19149 Length=5546 Score = 111 bits (122), Expect = 1e-19 Identities = 149/207 (72%), Gaps = 14/207 (7%) Strand=Plus/Plus Query 97932 ACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGG 97991 ||||||| | |||||||| |||||||| ||| ||||||||||| |||| || Sbjct 1617 ACCGCCTTCTTCGGCTCGGTCACCACCGGGGCCAAGAGGTGGGGGATGCCGTCATAGACC 1676 Query 97992 GTGAGTTCCACCATCTTCGGGTCGATCATGATGAGCTTGACCCGATCAGGATT--GGC-- 98047 | || |||| |||||| ||||||| |||||||| |||| |||| || ||| Sbjct 1677 GACAGCTCCAGCATCTTGGGGTCGACCATGATGAACTTG-------CAGGCTTCCGGCCC 1729 Query 98048 ---TCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGT 98104 |||||||||| || | | ||| | |||||| ||||||||||| ||||| Sbjct 1730 CAGGCGGTAGAGCAGCGACAGGATCATGGCGTTGATCGCCACCGACTTGCCCGAACCGGT 1789 Query 98105 GGCGCCAGCCACCAGCAGGTGGGGCAT 98131 || ||| |||||||||| ||||||||| Sbjct 1790 GGTGCCGGCCACCAGCACGTGGGGCAT 1816 Score = 84.2 bits (92), Expect = 2e-11 Identities = 173/257 (67%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 97578 CCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTATCGGTGAGTGATGCT 97637 |||| ||||| ||||| || ||| ||||||| |||||| ||| | || | Sbjct 1149 CCCAGCAGCTGTTCGGCACCCTGTTCGCCCAGGATGGTCCGGCTGTCGATCTTGGAGGTC 1208 Query 97638 GTGGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACG 97697 | ||| || | || | ||| | ||||| ||||| ||| |||| || || || Sbjct 1209 ACGTGGAAGGAAATCCGCGTCGGGAAGTTGGCCTTGATGGTGCCGGTGATGACGTCGACC 1268 Query 97698 GAGGGCCGCTGCGTCGCCAGGACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATG 97757 ||||| ||||| || || | || || || || ||||| || |||||| |||| || | | Sbjct 1269 GAGGGGCGCTGGGTGGCGACGATCAGGTGGATGCCGGCGGCCCGCGCCATCTGCGCCAGG 1328 Query 97758 CGGACAATGTTGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCG 97817 || || ||| || || || |||| | || ||| ||| ||||| || |||||| Sbjct 1329 CGCTGGATCGCGGCTTCCACGTC---CTTGCCGGCGACCAGCATCAGGTCGGCCAGTTCG 1385 Query 97818 TCGACCACTACCACGAT 97834 ||||| | |||||||| Sbjct 1386 TCGACGATCACCACGAT 1402 >seq43861 Length=3806 Score = 104 bits (114), Expect = 2e-17 Identities = 196/279 (70%), Gaps = 12/279 (4%) Strand=Plus/Plus Query 97859 GTGGCGCACGCCG-GCTTCCTGCATCTGCCGGTACCGGTCATCCATCTC---CACGGTGA 97914 || |||||||||| || || ||| |||||| || || ||||| || ||||| Sbjct 3082 GTTGCGCACGCCGAGCCGGCT-CATGGCCCGGTAGCGCTCCTCCATTTCGCGCACGGC-- 3138 Query 97915 GCCACCGCAGCGTCTTAACCGCCTCGTCGGGCTCGGTGACCACCGG-CTGCAAAAGGTGG 97973 |||| |||| || |||| | |||||||| |||||||| ||| | || ||| Sbjct 3139 -CCACTTGAGCGCGACCACGGCCTTCTTCGGCTCGGTCACCACCGGACTG-AGCAGATGG 3196 Query 97974 GGGATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGA-GCTTGAC 98032 || || || | ||| | | ||||||| ||||||||| |||| |||||||| || || Sbjct 3197 GGAATCCCATCGTAGACGCTCAGTTCCAGCATCTTCGGATCGACCATGATGAAGCGGCAC 3256 Query 98033 CCGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTT 98092 | | || || | ||||| |||| ||||| | ||| | ||||| | || ||||| Sbjct 3257 CTG-TCCGGCCCGTGCCGGTACAGCAGCGAAACGATCATGGCGTTGACGGAGACCGACTT 3315 Query 98093 GCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCAT 98131 |||||| ||||| | || ||||| |||||||| ||||| Sbjct 3316 GCCCGAACCGGTCGTACCGGCCACAAGCAGGTGCGGCAT 3354 Score = 96.9 bits (106), Expect = 2e-15 Identities = 191/279 (68%), Gaps = 9/279 (3%) Strand=Plus/Plus Query 97568 GTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTATCGGT 97627 ||| ||||| |||| || || ||| | || |||| |||||||| ||||| ||| | Sbjct 2677 GTCGCCCATGCCCAGCAGGTGTTCGCCGCCCGACTCGCCCAGGATCGTGCGGCTGTCGAT 2736 Query 97628 GAGTGATGCTG---TGGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGT 97684 || || || ||| || || | | | ||| | |||| ||||| || || Sbjct 2737 CT-TGCTGGTGACCTGG--AAGGAAATGCGGGTCGGGAAATTGGCCTTGATGGTACCGGT 2793 Query 97685 GACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATACCGGCTGCGCGCGC 97744 || || ||||| ||||| ||||| ||||||| || | || || ||||| |||||||| Sbjct 2794 GATGACGTCCACCGAGGGGCGCTGGGTCGCCATGATCAAGTGGATGCCGGCCGCGCGCGC 2853 Query 97745 CTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAG 97804 | |||| |||| ||| || ||||| || || |||| | || ||| ||| || Sbjct 2854 CATCTGCGCGAGGCGCTGGATCGCCGCCTCCACCTC---CTTGCCGGCGACCAGCATCAG 2910 Query 97805 GTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGGAG 97843 ||| || | |||||||| | |||||||||||||| || Sbjct 2911 GTCCGCCATCTCGTCGACGATCACCACGATGTAGGGCAG 2949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 350834061012880