Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq37644 131 2e-25 seq9473 100 3e-16 seq44056 91.5 1e-13 seq62509 84.2 2e-11 seq122735 82.4 8e-11 seq56386 82.4 8e-11 >seq37644 Length=6317 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 134514 AGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTG 134573 || ||||||||||| | ||| ||||||||| | || | || || || || ||| Sbjct 4531 AGGGTGGATTCCTTCTCAATATTGTAGTCGGAGAGAGTTCGCCCATCCTCAAGTTGCTTG 4472 Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 ||||| || || | | ||||||||| ||||| | |||||||| ||||||||||||| | Sbjct 4471 CCTGCGAAGATAAGTCTCTGCTGATCAGGCGGGGTCCCTTCTTTGTCTTGAATTTTTTCT 4412 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || ||||| || | || |||||| | ||| || || | ||| | || || ||||| | | Sbjct 4411 TTCACCGCTTCAATTGAGTCGGAAGGTTCAACATCTAAAGTGACCGTCTTCCCGGTCAGA 4352 Query 134694 GTTTTAACGAAAATTTGCATTTTGTTTTTG 134723 ||||| ||| |||| |||||| | || ||| Sbjct 4351 GTTTTTACGTAAATCTGCATTCTCTTGTTG 4322 >seq9473 Length=1265 Score = 100 bits (110), Expect = 3e-16 Identities = 118/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 ||| |||||||| || || || || |||| ||||||||||||||| || || || || || Sbjct 1253 GTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGGGGAATCCCCTCCTT 1194 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 || || || ||| ||||| || | | ||| || | ||||| |||||||| || Sbjct 1193 GTCCTGGATCTTTGCCTTGACGTTCTCGATAGAGTCAGAGGGCTCCACATCGAGAGTGAT 1134 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || ||||| | ||| || ||||| || ||||||||| Sbjct 1133 CGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCATTTTG 1094 >seq44056 Length=2137 Score = 91.5 bits (100), Expect = 1e-13 Identities = 108/144 (75%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 ||||| | ||||| | |||| ||| || ||| ||||| || ||||||||||| | | Sbjct 454 CCTCCGCGGAGTCTGAGGACGATGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAC 395 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || || || | |||||||||||||||||| |||| ||||||||||| || || Sbjct 394 AGCGTCCTGCCT-TCCTGGAGCTGTTTGCCTGCAAAGATCAGGCGCTGCTGATCAGGAGG 336 Query 134606 TATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || || |||||||| || Sbjct 335 GATGCCCTCCTTGTCTTGAATCTT 312 >seq62509 Length=1081 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 ||| ||| || ||||| || || | ||| | || ||||||||||| | || | Sbjct 867 AGTTGCAGGACAAGGTGCAGGGTCGTCTCCCTCTGGATGTTGTAGTCTGATGCAGTTCGC 808 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| ||||||||||| || | ||| ||||| ||||||||||| | ||| || || || Sbjct 807 CCGTCCTCGAGCTGTTTTCCCGAAAATATCAATCGCTGCTGATCTGCCGGGATCCCCTCC 748 Query 134616 TTTTCTTGAATTTTTTGTTTGACC 134639 || || ||||| |||| ||||||| Sbjct 747 TTGTCCTGAATCTTTTCTTTGACC 724 >seq122735 Length=1630 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| || ||||| || | |||| |||||||||| | || ||| |||||| Sbjct 393 AGGTGAAGAGTGGACTCATCCTGAACGTTGTAGTCGGAGAGCGTACATCCGTCCTCGAGC 334 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || |||||||||||||||||||||| ||| || || || || || ||| | | ||| Sbjct 333 TGCTTTCCTGCAAAAATCAAACGCTGCTCATCTGGTGGGATCCCCTCCTTTGCCTTAATC 274 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 ||| || | | || | | ||| || || ||| || ||||| | |||||| || Sbjct 273 TTTGCCTTCAACTTCTCGACAGAGTCTGAGGACCGCACCTCAAGAGTGACGGTTTTGCCC 214 Query 134688 GTTAAAGTTTTAACGAAAATTTG 134710 |||| | || | ||||| || Sbjct 213 TCTAAATTCTTCAGAAAAATCTG 191 >seq56386 Length=466 Score = 82.4 bits (90), Expect = 8e-11 Identities = 97/129 (75%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| || || | ||| || || || ||||||||||| || ||||||||||| | | Sbjct 339 CCGCCTCTCAGGCGGAGCACCAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 398 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || | | | || || ||||| ||||||||||| || | ||||||||||| || || Sbjct 399 AGCGTTCTCCCA-TCCTCAAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGATCAGGGGG 457 Query 134606 TATGCCTTC 134614 || || || Sbjct 458 AATTCCCTC 466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504471688858800