Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq13327 426 2e-114 seq303 425 6e-114 >seq13327 Length=3816 Score = 426 bits (472), Expect = 2e-114 Identities = 666/950 (70%), Gaps = 2/950 (0%) Strand=Plus/Minus Query 157705 CCGTTTGTATGTTGGTTGGTTCGGTGTACTGATGATTCCTACGTTGCTTGCTGCAACTAT 157764 |||| | ||| | || ||||| || || | ||| | || ||||| | ||| ||| Sbjct 2796 CCGTCTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGCAG-TAT 2738 Query 157765 C-TGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATTGACGGCATCCGCGAAC 157823 | |||||||| | || || || || || || || || || ||||| || || || || | Sbjct 2737 CGTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGC 2678 Query 157824 CAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTAGTT 157883 ||||| | || || || | || || || || || ||||| || || || || || |||| Sbjct 2677 CAGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTT 2618 Query 157884 CAAACGCAATCGGTCTCCACTTCTACCCCATCTGGGAAGCAGCATCTCTTGACGAGTGGC 157943 |||| || || ||| | || || || | | || || || | | |||| || || Sbjct 2617 CAAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGAT 2558 Query 157944 TGTATAACGGTGGTCCTTTCCAACTTGTAGTATTCCACTTCCTGATCGGCATCTATGCCT 158003 |||||||||| || |||| |||| | || ||| | || ||| | ||||| | | | Sbjct 2557 TGTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCAT 2498 Query 158004 ATATGGGACGTGAGTGGGAACTCTCTTACCGTTTAGGTATGCGCCCATGGATCTGTGTAG 158063 || | || |||||||| ||| | |||||||||||| ||||| || || || | |||| Sbjct 2497 ATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAG 2438 Query 158064 CATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTATTCCTAGTCTATCCTTTCGGTCAAG 158123 | | ||||| ||||| || ||||| || ||||| ||||| || || |||| |||| Sbjct 2437 CTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAG 2378 Query 158124 GTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTAT 158183 | ||||| || |||| |||||||| || || ||||| || || |||| |||||| |||| Sbjct 2377 GATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTAT 2318 Query 158184 TCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTAT 158243 |||| ||||| || || ||| | |||||||| ||||| ||| || || || || |||| Sbjct 2317 TCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTAT 2258 Query 158244 TCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTCGTG 158303 | || |||||| | || ||||||||||||| | | ||||| || | | || | Sbjct 2257 TTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTA 2198 Query 158304 AAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAAGAAGAGACCT 158363 || | |||| || |||| || || || ||||| ||||| || ||| | || || | Sbjct 2197 TGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACAT 2138 Query 158364 ACAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCA 158423 | || ||||| || || || || |||||||| ||| | ||||| |||| ||| || | Sbjct 2137 ATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTA 2078 Query 158424 ACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCA 158483 | ||||| ||||| || |||||||||||||| || || || || || ||||| || | Sbjct 2077 ATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAA 2018 Query 158484 CCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCA 158543 | || | || | || ||||| ||||| || || || ||||| |||||||| || | Sbjct 2017 CAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAA 1958 Query 158544 TCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGCGCTGGTC 158603 || |||||| | || ||||| | | || || ||| | | || || || || Sbjct 1957 TCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATC 1898 Query 158604 TTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTGGAT 158653 | || |||||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct 1897 TAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGAT 1848 >seq303 Length=42796 Score = 425 bits (470), Expect = 6e-114 Identities = 685/980 (70%), Gaps = 6/980 (1%) Strand=Plus/Minus Query 159415 TTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTCTTCCCACTGCTTATATGGCCATTGGC 159474 ||| | ||||| || || || ||| | | ||| |||| || |||||| |||| | || Sbjct 27674 TTTATATTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGA 27615 Query 159475 GGTTGGCTTACTGGCACGACTTTTATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCC 159534 || || || || || ||||| | || |||||||| | || ||||| || | | Sbjct 27614 GGATGATTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGC 27555 Query 159535 TACCTTGAAGGTGCTAATTTTCTCACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGT 159594 || || |||||| ||||||| | || || ||||| || ||||| ||| || ||||| Sbjct 27554 TATCTAGAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGG 27495 Query 159595 CATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAAGGCGACTTCCAACGC--TGGTGCC 159652 || || ||| | ||| ||| ||||| || |||| || |||| ||| | |||| | Sbjct 27494 CACTCGCTTTTATTACCTTGAGGTCCCGAAGCTCAGGG--ACTTTTAACTCGATGGTATC 27437 Query 159653 AACTTGGAGGGATTTGGTCCTTTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTA 159712 || ||||||| | || ||| | || | || || | || | | ||| ||| Sbjct 27436 AAGTTGGAGGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTTT 27377 Query 159713 TGCTACGGCAATTTGAAATTGCTCGTCTAGTTGGTATCCGTCCTTACAATGCTATTGCGT 159772 || | |||||||||||||| | |||| | ||||| || ||||| ||||| | Sbjct 27376 GTTTAAGACAATTTGAAATTGCAAGGTTAGTGCAGGTTCGTCCATATAATGCAATTGCTT 27317 Query 159773 TCTCTGGTCCTATTGCTGTTTTTGTCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTT 159832 || | ||||| ||||| |||||||| || || | || ||||| | ||||| | Sbjct 27316 TCACCGGTCCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGA 27257 Query 159833 CATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTGTTGTTCCTTC 159892 || || |||||||| ||||| || || || || || |||||||| | | ||| ||| Sbjct 27256 GTTGATTTTTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTTC 27197 Query 159893 AGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAG 159952 | || || || ||||| || || || || |||||||||||||| || || ||||| ||| Sbjct 27196 AAGGGTTTCATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTAG 27137 Query 159953 GTGGAGCACTGTTGTGTGCAATCCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATG 160012 | || || | |||| ||| |||||||| || |||||| | || || || | | |||||| Sbjct 27136 GAGGTGCGTTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAAGATG 27077 Query 160013 GAGAACAAGCAAACACATTTAAGGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTA 160072 | | |||| ||| || ||| || || ||| ||||||||||||||| | Sbjct 27076 GTGTGTCGTATGACACCTTTCGTGCTTTTAGCCCAACGCAATTAGAAGAGACTTATTCAA 27017 Query 160073 TGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGT 160132 |||| || ||||| || || || || ||||| || || || || |||||||||||||| | Sbjct 27016 TGGTAACCGCAAATCGTTTTTGATCTCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGTT 26957 Query 160133 GGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCA 160192 || | ||||| || ||||| || || || || | || |||| || || || |||| | Sbjct 26956 GGTTACATTTCTTTATGTTATTCGTACCGGTAACTGGCTTATGAACTTCTGCTTTTGGGA 26897 Query 160193 TTATTGGTCTTGCTTTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAG 160252 | ||||||| || || || | | || |||||||| ||| ||| ||| | |||||| Sbjct 26896 TGGTTGGTCTGGCCTTAAATTTAAGGGCATACGATTTTGTGTCTCAAGAGTTACGAGCAG 26837 Query 160253 CAGAAGATCCTGAATTTGAGACCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTC 160312 | |||||||||||||| || || || || ||||| || || | | ||||||||| | | Sbjct 26836 CCGAAGATCCTGAATTCGAAACGTTTTATACCAAAAATATATTGCTTAATGAAGGAATCC 26777 Query 160313 GTGCTTGGATGGCACCTGC-TGATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTA 160371 ||||||| ||||| ||| || ||||| |||||||| || || ||||| |||||||| Sbjct 26776 GTGCTTGAATGGC-TATGCAGGACCAACCTCATGAAAATTTCATTTTCCCAGAGGAAGTT 26718 Query 160372 CTACCTAGAGGTAACGCACT 160391 ||||| | || || || || Sbjct 26717 TTACCTCGCGGAAATGCTCT 26698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571973288868000