Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq13327 455 4e-123 seq303 378 8e-100 seq11659 84.2 2e-11 >seq13327 Length=3816 Score = 455 bits (504), Expect = 4e-123 Identities = 672/949 (71%), Gaps = 2/949 (0%) Strand=Plus/Minus Query 159989 CCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCAT 160048 ||| || ||| |||| ||||| || || | ||| | ||||| | || |||| || Sbjct 2796 CCGTCTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGCAGT-AT 2738 Query 160049 C-TGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAAC 160107 | |||||||| | || || || || || || || || || || || || || ||||| | Sbjct 2737 CGTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGC 2678 Query 160108 CCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTT 160167 | || | || || || | || || || || || ||||| || || || || || || Sbjct 2677 CAGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTT 2618 Query 160168 CCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGC 160227 | || || |||||| | || || ||| | | || || || | |||| || || Sbjct 2617 CAAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGAT 2558 Query 160228 TGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTTATCGGCATCTATGCAT 160287 |||||||||| || |||| |||| |||| ||| | || ||| | ||||| | ||| Sbjct 2557 TGTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCAT 2498 Query 160288 ATATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAG 160347 || | || |||||||| ||| | ||||||||||| ||||| || || || | |||| Sbjct 2497 ATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAG 2438 Query 160348 CATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTATATCCTTTCGGTCAAG 160407 | | ||||| ||||| || |||||||| |||||||| || || || || |||| |||| Sbjct 2437 CTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAG 2378 Query 160408 GTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTAT 160467 | ||||| || |||| |||||||| || || ||||| || || |||| |||||| |||| Sbjct 2377 GATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTAT 2318 Query 160468 TCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTAT 160527 |||| ||||| || |||||| | ||||| || ||||||||| || || || || |||| Sbjct 2317 TCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTAT 2258 Query 160528 TCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTCGTG 160587 | || |||||||| || ||||||||| ||| | | ||||| || | | || | Sbjct 2257 TTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTA 2198 Query 160588 AAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGAAGAGACCT 160647 || | |||| || |||| || || || ||||| ||||| || || | || || | Sbjct 2197 TGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACAT 2138 Query 160648 ACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCATTCA 160707 | || ||||| || || || || |||||||| ||| | ||||| |||| ||| || | Sbjct 2137 ATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTA 2078 Query 160708 ACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAATCTGGTTCA 160767 | ||||| ||||| | ||||||||||| ||| || || ||||| |||||||| || | Sbjct 2077 ATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAA 2018 Query 160768 CTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCA 160827 | || | || |||| || ||||| ||||| || || || ||||| |||||||| || | Sbjct 2017 CAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAA 1958 Query 160828 TCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCGTGCTGGTC 160887 || | |||| |||| |||||| | | || || || | | |||||||| || Sbjct 1957 TCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATC 1898 Query 160888 TTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGA 160936 | || |||||||| ||||||||||||||||| ||||| ||||| || || Sbjct 1897 TAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGA 1849 >seq303 Length=42796 Score = 378 bits (418), Expect = 8e-100 Identities = 675/980 (69%), Gaps = 4/980 (0%) Strand=Plus/Minus Query 161730 TTTGTTGGCTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGG 161789 ||||||||||| || ||| | | ||| |||| || |||||| | || | || || || Sbjct 27668 TTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGAGGATGA 27609 Query 161790 CTTACTGGCACAACTTTCGCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTT 161849 || || || ||||||| ||| || |||||| | |||||||| || | |||||| Sbjct 27608 TTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGCTATCTA 27549 Query 161850 GAGGGTGCAAACTTTCTTACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCT 161909 || ||| || ||| | || || | || ||| || ||| | ||||| || || Sbjct 27548 GAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGGCACTCG 27489 Query 161910 CTTCTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGG 161969 ||| | | | || ||||| || ||||| || ||| || ||| ||| |||| Sbjct 27488 CTTTTATTACCTTGAGGTCCCGAAGCTCAGGGACTTTTAACTCGATGGTATCAAGTTGGA 27429 Query 161970 GGACTCTGGAATTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGT 162029 || | || |||||| | || | ||||| |||| | | ||||| | | Sbjct 27428 GGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTTTGTTTAAGA 27369 Query 162030 CAGTTTGAACTGGCACGTCTTATTGGTA-TCCGTCCCTACAATGCTATTGCGTTCTCTGG 162088 || |||||| | ||| | ||| || | ||||| || ||||| ||||| ||| | || Sbjct 27368 CAATTTGAAATTGCAAGG-TTAGTGCAGGTTCGTCCATATAATGCAATTGCTTTCACCGG 27310 Query 162089 TCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGGTT 162148 ||| ||||| |||||||| ||||| | || || || || ||||| | ||||| || Sbjct 27309 TCCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGAGTTGATT 27250 Query 162149 TTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTTCAAGGATT 162208 ||| || || ||||| ||||| || || |||||||| | | || ||||||| || Sbjct 27249 TTTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTTCAAGGGTT 27190 Query 162209 CCATAACTGGACCCTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGC 162268 |||||||| || ||||| || |||||||||||||| || || ||||| |||| || || Sbjct 27189 TCATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTAGGAGGTGC 27130 Query 162269 ACTTCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACA 162328 | | ||||| || || |||| || || ||||||| ||||| | ||||| | Sbjct 27129 GTTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAAGATGGTGTGTC 27070 Query 162329 AGCAAACACCTTTAAGGCGTTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCAC 162388 |||||||| || ||| | || || |||||||||||||| ||||| || Sbjct 27069 GTATGACACCTTTCGTGCTTTTAGCCCAACGCAATTAGAAGAGACTTATTCAATGGTAAC 27010 Query 162389 TGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCA 162448 ||||| || || || || ||||| || || | || |||||||||||||| ||| | || Sbjct 27009 CGCAAATCGTTTTTGATCTCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGTTGGTTACA 26950 Query 162449 TTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGG 162508 ||| || ||||| || || || || | || |||| || || || |||| || |||| Sbjct 26949 TTTCTTTATGTTATTCGTACCGGTAACTGGCTTATGAACTTCTGCTTTTGGGATGGTTGG 26890 Query 162509 TCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGA 162568 ||| || | || | | || |||||||| ||| ||| ||| | ||||||| ||||| Sbjct 26889 TCTGGCCTTAAATTTAAGGGCATACGATTTTGTGTCTCAAGAGTTACGAGCAGCCGAAGA 26830 Query 162569 TCCTGAGTTTGAAACGTTCTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATG 162628 |||||| || |||||||| || || || || || |||| ||||||||| | ||||| || Sbjct 26829 TCCTGAATTCGAAACGTTTTATACCAAAAATATATTGCTTAATGAAGGAATCCGTGCTTG 26770 Query 162629 GTTAGCACCTGC-CGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTA 162687 | || ||| |||||||| ||||| || || || |||||||| |||||| | ||| Sbjct 26769 AATGGC-TATGCAGGACCAACCTCATGAAAATTTCATTTTCCCAGAGGAAGTTTTACCTC 26711 Query 162688 GAGGCAACGCCCTTTAATAA 162707 | || || || || ||| || Sbjct 26710 GCGGAAATGCTCTCTAACAA 26691 >seq11659 Length=22639 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 157439 GTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCAGGTTCGAGTCCTG 157497 ||||||||| ||||||||||| ||||||||||||||| ||||| ||||||||| ||||| Sbjct 16981 GTAGCTCAGCTGGATAGAGCATCTGCCTTCTAAGCAGACGGTCACAGGTTCGAATCCTG 17039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 558478079478000