Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq13327 489 2e-133 seq303 372 4e-98 seq71784 86.0 8e-12 seq29682 82.4 9e-11 >seq13327 Length=3816 Score = 489 bits (542), Expect = 2e-133 Identities = 680/950 (72%), Gaps = 2/950 (0%) Strand=Plus/Minus Query 181010 CCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTAT 181069 ||| || ||| |||| ||||| || || | ||| | ||||| | || |||| ||| Sbjct 2796 CCGTCTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGCAG-TAT 2738 Query 181070 C-TGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAAC 181128 | |||||||| | || || || || || || || || || || || || || ||||| | Sbjct 2737 CGTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGC 2678 Query 181129 CCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTT 181188 | || | || || || | || || || || || ||||| || || || || || || Sbjct 2677 CAGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTT 2618 Query 181189 CCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGC 181248 | || || |||||| | || || ||| | | || || || | |||| || || Sbjct 2617 CAAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGAT 2558 Query 181249 TGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATTTATGCAT 181308 |||||||||| || |||| |||| |||| || | || ||| | ||||| | ||| Sbjct 2557 TGTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCAT 2498 Query 181309 ACATGGGACGTGAATGGGAACTCTCTTACCGCTTAGGTATGCGCCCCTGGATCTGTGTTG 181368 | | || ||||| || ||| | |||||| ||||| ||||| || || || | || | Sbjct 2497 ATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAG 2438 Query 181369 CATACTCTGCTCCAGTCGCAGCAGCATCTGCTGTATTCCTAGTCTATCCTTTCGGTCAAG 181428 | | |||||| ||||| ||||||||||| |||||||| ||||| || || |||| |||| Sbjct 2437 CTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAG 2378 Query 181429 GTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGTTT 181488 | ||||| || || | |||||| || || || ||||| |||||||||| |||||| || | Sbjct 2377 GATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTAT 2318 Query 181489 TCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGTAT 181548 |||| |||||||| || || | ||||| || ||||||||| || || ||||| |||| Sbjct 2317 TCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTAT 2258 Query 181549 TTGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTG 181608 |||| || || | || ||||| ||||| || ||||| |||||||| | | | | Sbjct 2257 TTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTA 2198 Query 181609 AGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACAT 181668 ||| | |||| ||| |||| || ||||| || || |||||||| ||| | || |||| Sbjct 2197 TGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACAT 2138 Query 181669 ACAACATCGTCGCCGCCCACGGTTACTTTGGTCGCTTGATCTTCCAATATGCTTCATTCA 181728 | || ||||| ||||| ||||| ||||| || || | ||||| |||| || || | Sbjct 2137 ATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTA 2078 Query 181729 ACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCA 181788 | ||||||||||| | ||||||||||| ||| || || |||||||||||||| || | Sbjct 2077 ATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAA 2018 Query 181789 CCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCTA 181848 | ||| |||| | || || ||||| || || || ||||||||||| |||||||| || | Sbjct 2017 CAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAA 1958 Query 181849 TCCTCGACGGACAAGGACGTGTCCTCAACACCTGGGCAGACGTGCTCAACCGTGCCGGTC 181908 || | || | | |||||||||| | | || || || | | || ||||| || Sbjct 1957 TCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATC 1898 Query 181909 TCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGAT 181958 | || |||||||| ||||| ||||| ||||||||||| ||||| || ||| Sbjct 1897 TAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGAT 1848 >seq303 Length=42796 Score = 372 bits (412), Expect = 4e-98 Identities = 699/1018 (69%), Gaps = 7/1018 (1%) Strand=Plus/Minus Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430 ||||||| | | || | ||| | ||| | ||||| || || || ||| | | ||| Sbjct 27700 TGGACGATTTTATAAAGCAGGAAAGATTTATATTTGTTGGCTGATCCGGATTATTGCTTT 27641 Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490 |||| || |||||| | || | || || || || || || |||| || || |||| Sbjct 27640 TTCCGACCGCTTATTTGGCGGTCGGAGGATGATTTGTGGGTACTACTTTCGTAACAAGTT 27581 Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 182550 |||| | || ||||| || ||| |||||| |||||| ||| ||| | || || |||| Sbjct 27580 GGTATTCTCATGGTCTAGCATCTAGCTATCTAGAAGGTTGTAATTTTTTAACTGCTGCTG 27521 Query 182551 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 182610 | || ||||| ||| || ||||| || || ||| | ||| ||| ||||| || ||| Sbjct 27520 TATCCACGCCGGCTAATTGCATGGGGCACTCGCTTTTATTACCTTGAGGTCCCGAAGCTC 27461 Query 182611 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACG 182670 |||| ||| || |||| ||| |||| || | || ||||| | || | || | Sbjct 27460 AGGGACTTTTAACTCGATGGTATCAAGTTGGAGGTTTATGAAATTTTATCGCCTTTCATG 27401 Query 182671 GTGCCTTCGCTCTCATTGGTTTCATGCTTAGG-CAATTTGAACTTGCTCGCCTGATTGGA 182729 | |||| | | || || || ||| | ||||||||| |||| | | | || | Sbjct 27400 GGACCTTAGGGTTGGCAGGATTT-TGTTTAAGACAATTTGAAATTGCAAGGTT-AGTGCA 27343 Query 182730 A-TCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTT 182788 | | || || ||||| |||||||| | ||||| ||||| || || || ||| || Sbjct 27342 GGTTCGTCCATATAATGCAATTGCTTTCACCGGTCCAATTGCAGTTTTTGTATCTGTCTT 27283 Query 182789 CCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGC 182848 | || |||||||| || || | ||| ||||| || || ||||| || || || Sbjct 27282 TTTAATTTATCCTTTAGGTCAAGCGAGTTGATTTTTTGCACCAAGTTTTGGAGTGGCTGC 27223 Query 182849 GATCTTCAGGTTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTCCA 182908 || || || || | | ||| |||| || || || ||||| ||||| || || ||||| Sbjct 27222 CATTTTTAGATTTTTACTATTCTTTCAAGGGTTTCATAACTGAACACTGAATCCTTTCCA 27163 Query 182909 TATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTCAC 182968 ||||||||| || || ||||| | || || || | | ||| |||||||| | || Sbjct 27162 TATGATGGGTGTCGCAGGTATTTTAGGAGGTGCGTTATTGTCTGCCATCCATGGAGCGAC 27103 Query 182969 AGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGATTC 183028 ||| | |||||||| ||| ||||||| | | |||| ||| || || | Sbjct 27102 TGTACAAAATACCTTATATAAAGATGGTGTGTCGTATGACACCTTTCGTGCTTTTAGCCC 27043 Query 183029 CACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCTT 183088 || || || ||||| ||||| ||||| || || ||||||||||| || || || || Sbjct 27042 AACGCAATTAGAAGAGACTTATTCAATGGTAACCGCAAATCGTTTTTGATCTCAGATTTT 26983 Query 183089 CGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCAT 183148 || || || ||| || ||||||||||| || ||||||||||| || || || || | Sbjct 26982 TGGAGTAGCTTTTTCTAACAAGCGTTGGTTACATTTCTTTATGTTATTCGTACCGGTAAC 26923 Query 183149 GGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGA 183208 || | || ||| || ||||||| |||| || || | ||| | | || || || Sbjct 26922 TGGCTTATGAACTTCTGCTTTTGGGATGGTTGGTCTGGCCTTAAATTTAAGGGCATACGA 26863 Query 183209 TTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACAAA 183268 ||||||| ||||||| | ||||||| ||||||||||| ||||| ||||| || || || Sbjct 26862 TTTTGTGTCTCAAGAGTTACGAGCAGCCGAAGATCCTGAATTCGAAACGTTTTATACCAA 26803 Query 183269 GAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGC-CGATCAACCACATG 183327 || || | || ||||||||| | |||||||| |||| ||| || ||||| |||| Sbjct 26802 AAATATATTGCTTAATGAAGGAATCCGTGCTTGAATGGC-TATGCAGGACCAACCTCATG 26744 Query 183328 AAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACTGTGAACCAATTT 183385 |||| ||||| ||||| || |||||| ||||| | || || || || | ||| ||||| Sbjct 26743 AAAATTTCATTTTCCCAGAGGAAGTTTTACCTCGCGGAAATGCTCTCT-AACAAATTT 26687 >seq71784 Length=19437 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 161446 TGCGGGTGTAGCTCAGT-GGTAGAGCGTCAGTTTTCCAAACTGAATGTCGTCGGTTCAAG 161504 |||||| |||||||||| ||||||||||||| |||||| |||||||||| |||||| | Sbjct 13451 TGCGGGAGTAGCTCAGTTGGTAGAGCGTCAGCCTTCCAAGCTGAATGTCGCCGGTTCGAA 13510 Query 161505 TCCGATCTCCCGCT 161518 ||| ||||||||| Sbjct 13511 CCCGGTCTCCCGCT 13524 >seq29682 Length=14424 Score = 82.4 bits (90), Expect = 9e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 158161 TGGCGGAATTGGTAGACGCGCCAGGTTTAGGTTCTGGTGTCTTATGACGTGGAGGTTCAA 158220 |||||||||||||||||||||||||||||||| |||||| ||| | ||||| |||||| Sbjct 9709 TGGCGGAATTGGTAGACGCGCCAGGTTTAGGTCCTGGTGGCTTCGGCCGTGGGAGTTCAA 9650 Query 158221 GTC 158223 ||| Sbjct 9649 GTC 9647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613490621803200