Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq13327 455 4e-123 seq303 352 3e-92 >seq13327 Length=3816 Score = 455 bits (504), Expect = 4e-123 Identities = 672/949 (71%), Gaps = 2/949 (0%) Strand=Plus/Minus Query 158408 CCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCAT 158467 ||| || ||| |||| ||||| || || | ||| | ||||| | || |||| || Sbjct 2796 CCGTCTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGCAGT-AT 2738 Query 158468 C-TGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAAC 158526 | |||||||| | || || || || || || || || || || || || || ||||| | Sbjct 2737 CGTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGC 2678 Query 158527 CCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTT 158586 | || | || || || | || || || || || ||||| || || || ||||| || Sbjct 2677 CAGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTT 2618 Query 158587 CCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGC 158646 | || || |||||| | || || ||| | | || || || | |||| || || Sbjct 2617 CAAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGAT 2558 Query 158647 TGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGCAT 158706 |||||||||| || |||| |||| |||| || | || ||| | ||||| | ||| Sbjct 2557 TGTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCAT 2498 Query 158707 ATATGGGACGTGAATGGGAACTTTCATACCGCTTAGGTATGCGCCCCTGGATCTGTGTAG 158766 || | || ||||| || ||| | ||||| ||||| ||||| || || || | |||| Sbjct 2497 ATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAG 2438 Query 158767 CATATTCTGCACCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAG 158826 | | ||||||||||| || |||||||| |||||||| || || || || |||| |||| Sbjct 2437 CTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAG 2378 Query 158827 GTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTAT 158886 | ||||| || |||| |||||||| || || ||||| || || |||| |||||| |||| Sbjct 2377 GATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTAT 2318 Query 158887 TCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTAT 158946 |||| ||||| || || ||| | |||||||| ||||| ||| || || || || |||| Sbjct 2317 TCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTAT 2258 Query 158947 TCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTCGTG 159006 | || |||||| | || ||||||||||||| | | ||||| || | | || | Sbjct 2257 TTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTA 2198 Query 159007 AAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACAT 159066 || | |||| || |||| || ||||| || || |||||||| ||| | ||||||| Sbjct 2197 TGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACAT 2138 Query 159067 ATAATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCA 159126 |||||||||| || || || || |||||||| ||| | ||||| |||| ||| || | Sbjct 2137 ATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTA 2078 Query 159127 ACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCA 159186 | ||||| ||||| || |||||||||||||| || || || || || ||||| || | Sbjct 2077 ATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAA 2018 Query 159187 CCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCA 159246 | || | || | || ||||| ||||| || || || ||||| |||||||| || | Sbjct 2017 CAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAA 1958 Query 159247 TCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGTGCAGGTC 159306 || |||||| | || ||||| | | || || ||| | | || |||||| || Sbjct 1957 TCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATC 1898 Query 159307 TGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGA 159355 | || |||||||| ||||||||||||||||| ||||| ||||| || || Sbjct 1897 TAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGA 1849 >seq303 Length=42796 Score = 352 bits (390), Expect = 3e-92 Identities = 667/979 (68%), Gaps = 2/979 (0%) Strand=Plus/Minus Query 159941 TTTGTTGGCTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGG 160000 ||||||||||| || ||| | | ||| |||| || |||||| | || | || || || Sbjct 27668 TTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGAGGATGA 27609 Query 160001 CTTACTGGAACAACTTTCGCAACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTT 160060 || || || ||||||| ||| || |||||| | ||||| || || | |||||| Sbjct 27608 TTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGCTATCTA 27549 Query 160061 GAGGGTGCAAACTTTCTTACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCT 160120 || ||| || ||| | || || | || ||| || ||| | ||||| || || Sbjct 27548 GAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGGCACTCG 27489 Query 160121 CTTCTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGG 160180 ||| | | | || ||||| || ||||| || ||| | ||| ||| |||| Sbjct 27488 CTTTTATTACCTTGAGGTCCCGAAGCTCAGGGACTTTTAACTCGATGGTATCAAGTTGGA 27429 Query 160181 GGACTCTGGAATTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGT 160240 || | || |||||| | || | ||||| |||| | | ||||| | | Sbjct 27428 GGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTTTGTTTAAGA 27369 Query 160241 CAGTTTGAACTGGCACGTCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGT 160300 || |||||| | ||| | | | | ||||| || ||||| ||||| ||| | ||| Sbjct 27368 CAATTTGAAATTGCAAGGTTAGTGCAGGTTCGTCCATATAATGCAATTGCTTTCACCGGT 27309 Query 160301 CCTATTGCTGTCTTTGTCAGCGTATTCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTT 160360 || ||||| || ||||| || || | || || || || ||||| | ||||| ||| Sbjct 27308 CCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGAGTTGATTT 27249 Query 160361 TTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTT 160420 || || || ||||| ||||| || || |||||||| | | ||| ||||||| ||| Sbjct 27248 TTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTTCAAGGGTTT 27189 Query 160421 CACAACTGGACGCTTAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCA 160480 || ||||| || || || || |||||||||||||| || || ||||| ||||||| || Sbjct 27188 CATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTAGGAGGTGCG 27129 Query 160481 CTGCTCAGTGCCATCCATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGAGAACAA 160540 | | |||||||||||| | |||||| | || || | ||| ||||||| | Sbjct 27128 TTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAAGATGGTGTGTCG 27069 Query 160541 GCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACT 160600 | |||||| || ||| | || || ||||||||||||||| ||||| || Sbjct 27068 TATGACACCTTTCGTGCTTTTAGCCCAACGCAATTAGAAGAGACTTATTCAATGGTAACC 27009 Query 160601 GCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCAT 160660 ||||| || || || || ||||| || || | || |||||||||||||| ||| | ||| Sbjct 27008 GCAAATCGTTTTTGATCTCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGTTGGTTACAT 26949 Query 160661 TTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCAGTATTGGCATTATTGGT 160720 || || ||||| || || || || | || | || || || | |||| || ||||| Sbjct 26948 TTCTTTATGTTATTCGTACCGGTAACTGGCTTATGAACTTCTGCTTTTGGGATGGTTGGT 26889 Query 160721 CTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAGAAGAT 160780 || || | ||| | | || |||||||| ||| ||||||| | ||||||| |||||| Sbjct 26888 CTGGCCTTAAATTTAAGGGCATACGATTTTGTGTCTCAAGAGTTACGAGCAGCCGAAGAT 26829 Query 160781 CCAGAATTTGAGACCTTCTACACCAAGAACATCCTACTGAATGAAGGACTACGTGCATGG 160840 || ||||| || || || || ||||| || || | || ||||||||| | ||||| || Sbjct 26828 CCTGAATTCGAAACGTTTTATACCAAAAATATATTGCTTAATGAAGGAATCCGTGCTTGA 26769 Query 160841 TTAGCACCTGC-CGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAG 160899 | || ||| |||||||| ||||| || || || |||||||| |||||| | ||| | Sbjct 26768 ATGGC-TATGCAGGACCAACCTCATGAAAATTTCATTTTCCCAGAGGAAGTTTTACCTCG 26710 Query 160900 AGGCAACGCCCTTTAATAA 160918 || || || || ||| || Sbjct 26709 CGGAAATGCTCTCTAACAA 26691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551460570595200