Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_027204.1 Length=194701 Score E Sequences producing significant alignments: (Bits) Value seq7091 96.9 4e-15 >seq7091 Length=10687 Score = 96.9 bits (106), Expect = 4e-15 Identities = 173/253 (68%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 176420 ATAGATGTGGGTATCACCAAGGTTGCCGATCAGTTCCCCGACTTCCAAGCCGCATTCCAG 176479 ||| | ||| | |||||| || || || | |||||| || | |||| | || | Sbjct 9421 ATAAAGGTGCGCATCACCCAGCGTGTGGACGAAGTCCCCGGGCTCGAGCCCGCTTGCCTG 9480 Query 176480 CGCGATCAGATGTGTCAGGAGTGCGTAAGAGGCGATGTTGAATGGAAGCCCCAAGAAGAC 176539 || |||| ||||| || || || |||||||||||||| || | |||| |||| Sbjct 9481 GGCCATCATCATCGTCAGCAGCGCATAGGAGGCGATGTTGAAGGGCACGCCCAGAAAGAT 9540 Query 176540 GTCCACGGACCGCTGATTCCAAAGGCAGGACAGTTTCCCGTTGCGGACATAGAACTGGAA 176599 ||| || ||||||| ||||||| || || | | ||| ||||||||||| Sbjct 9541 GTCGGCGCTGCGCTGATAGAGCTGGCAGGAAAGCCGGCCCTCGGCGACGTAGAACTGGAA 9600 Query 176600 ACCGTAGTGACACGGCGGCAAAGCCATTAGATCGACCGCCCCGACATTCCAAGCCGAGAC 176659 | | |||||||||||||| ||||| | |||| | || | |||||||| ||||| || Sbjct 9601 CAGGCAATGACACGGCGGCAAGGCCATGCGCTCGATCTCCGCCACATTCCAGGCCGACAC 9660 Query 176660 CATATGACGACGG 176672 || | | || ||| Sbjct 9661 CACAAGCCGGCGG 9673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621773007116400