Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq10895 297 3e-75 >seq10895 Length=16309 Score = 297 bits (328), Expect = 3e-75 Identities = 1001/1549 (65%), Gaps = 21/1549 (1%) Strand=Plus/Minus Query 69084 AATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGA 69143 |||||| | |||||||| ||| || || || | ||| || || ||||| | | |||| || Sbjct 11538 AATAAAGGTATCTGCCAGTCCTTGGACTCCCAAACCTATTGGCCTATGGCGCATATTGGA 11479 Query 69144 ACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATT-TCGGA 69202 | |||| ||||| | || || ||||| |||| || | ||||||| || | || Sbjct 11478 ATTTTCCGCTTCCTTTACGGGGTAGTAATTCCTATCAATGACCCTATTAAGGTTCTTGGT 11419 Query 69203 CTACTACTTT--AACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTATAACAAA 69260 | | ||| |||| | | | ||| || |||||| || || ||||||| Sbjct 11418 CACCCGTTTTGTAACCTTGAACAATTCCTTGTGA---TCAAATTTGCCCCCTTTAACAAA 11362 Query 69261 CATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTG 69320 ||| || |||| ||| || | |||||||| ||||| |||| | | ||||| Sbjct 11361 CATGGGAAGAGCTATAGAGGCCAAGTTACAAACCGCTACTTCATCGGGGGAGGTATATTC 11302 Query 69321 TATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTT 69380 | |||||| ||||| ||||| | || |||||| |||| || | |||||| || || Sbjct 11301 CAATATCTCGGTACAAAGATTGGAAGATCGGATAGTACCCAAGTTCTTCTGATTGCTTTT 11242 Query 69381 TTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGAT 69440 || || ||||| ||||| ||| | || || || || |||||||| ||||| | Sbjct 11241 ACGATTGGCCGCATCCTTATAAAGCATATAGGGCGTTCCCGTCTCAATCTGGGATTCCAA 11182 Query 69441 AATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCTTTT---TC 69497 || || ||| | |||| || |||| | || ||| || ||| || | | || Sbjct 11181 TATTTTTTCCCATAAATCCCTGGCCTTTA---CCGTTTTGCGACCCTTATCCTCTGCCTC 11125 Query 69498 ATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTC 69557 ||||| |||||| ||| ||||| || | | | |||||| |||||||| Sbjct 11124 ATATTTCAAATATAGTTTTTCAAATTCCTCACTGTGATTTGAAAACAATCCTGGACATTC 11065 Query 69558 ATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGG 69617 ||| || ||||| || | ||| | |||| ||| || || ||||| || | ||| || Sbjct 11064 ATTGGGGCACATTAAGGTCCAATCTTCATTGGCCTCCACGCGCTTCATGAACAAATCTGG 11005 Query 69618 AATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAtttttttt 69677 |||||| | || || ||||| | || | ||||||| ||||| || || || Sbjct 11004 AATCCACATGGCGTAGAACAGATCACGGGCACGCATTTCTTCCTTTCCGTGGTTCTTCTT 10945 Query 69678 AAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCC 69737 | || | ||| || | |||||| | |||||| || |||| ||| || || | ||| Sbjct 10944 CAATTCCAAAAAGTCAAAAATATCCGCATGCCAAGGCTCTACATAAATGGCAAAACTTCC 10885 Query 69738 CGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCAT 69797 ||| || ||||| ||||| | ||| | || |||| |||| | || || ||||| Sbjct 10884 TTTTCGCTTCCCGCCTCCTTGATCAACGTAGCGTGCCGTGTCATTAAATACCCTTAGCAT 10825 Query 69798 CGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT 69857 || | ||||||||| || ||||||| || || | ||||| ||| | || |||| Sbjct 10824 AGGGACAATACCATTGGAAGTACCATTGGTACCGGCTATATATGATCCCGTAGCCCGAAC 10765 Query 69858 ATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAA 69917 ||| ||| || || || ||||| || || || |||||| || | ||||| Sbjct 10764 ATTGTGAATGGAAAGTCCGATTCCCCCCGCAGATTGGGAGATTTTCGCGGTCTGCTTCAA 10705 Query 69918 TGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACAT 69977 ||||| || ||||| || || || || || ||||| | || || ||| ||||| Sbjct 10704 GGTGTCGTAAATACCATCGATACTGTCGTCCTTCATGGCCAATAGGAAGCAGGAGGACAT 10645 Query 69978 TTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTC 70037 || | | ||||| | || || | ||||| | ||| || ||||| |||||| Sbjct 10644 CTGCGGCTTGGGCGTTCCGGAGTTGAAGAGGGTAGGTGTTGCATGGGTGAAATATTTTTT 10585 Query 70038 AGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGA--TGAATTCCTATC 70095 || | ||| | || ||||| || || || || |||| || | | || ||||| | | Sbjct 10584 TGACATCAGCTCATAGGTTTCTATGGCAGAGTCCATAT--CATTTAAGTGGATTCCAACC 10527 Query 70096 GCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGG 70155 || || ||||||||||||||||| || ||||| | | || || | || | || Sbjct 10526 GCAACGCGCATCAACATATGCTGGGGCCGTTCGGCTATCTTCCCGTTCAGCTTAAGGAGA 10467 Query 70156 TATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATA 70215 || ||| |||| || || || || || || | |||| ||| || | | ||| || Sbjct 10466 TAGGATCGCTCCAAGGTCTTGAAGCCGAAGTAATCGTATCCAAAATCACGATTGTATATG 10407 Query 70216 ATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATA-ACAGTAGGTGAGAT 70274 ||| |||| ||||| ||| || || || || || | ||| || | || | Sbjct 10406 ATAGTCGAATCCAGTTTTTCCGAATTTTCGGAAATTACCT-TATAGACCTCATCGGAAAG 10348 Query 70275 AATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATC 70334 || ||| | | |||||| || | ||||| | ||| | | | ||||| | ||| || Sbjct 10347 AAGCGGGGCTTTTTTACCCGTTCTGGGATTTATATACTCGTACAAATCCTTCATGGTCTC 10288 Query 70335 ACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAAT 70394 ||| |||||| || | ||| |||||||| || | || || | || || | | Sbjct 10287 GGAAAAGGATTTTTTGGTATTCTTATGTAAATTGGAAACGGAAATACGAGCGGCCAATTT 10228 Query 70395 AGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAA 70454 ||||| || ||||| || || ||||| || || || || || | || || Sbjct 10227 TGCATAATCCGGATGCGTAGTGGTCATGGTAGCAGCCTGCTCGGCGGCCAAATTGTCCAA 10168 Query 70455 TTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGGCTATTTTGATAGG 70514 || ||| ||||| || | ||| || || | || || ||| || | ||| || || Sbjct 10167 CTCCGAAGTGGTAACACCATCATAAAGTCCCTCTATTACCCGCATAGCCACTTTTATGGG 10108 Query 70515 ATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCTAATACGAGATGTAATTTTATC 70574 |||| | ||| ||| || |||||||||| |||||| | | | || || ||||| Sbjct 10107 GTCTACCAGTTC---GTTGAGGCCATAACATAGTTTTCTGACCCTTGCCGTGATCTTATC 10051 Query 70575 AAACATAACATTCTCCTTATTTCCACTTCGTTTAATGACGTACATTGTC 70623 ||||| | ||| || |||| | ||| || || |||||| || Sbjct 10050 GAACATCATCGGCTCTTTTCTTCCGTCCCTTTTTATTACATACATTTTC 10002 Score = 230 bits (254), Expect = 3e-55 Identities = 592/892 (66%), Gaps = 25/892 (3%) Strand=Plus/Minus Query 39325 TTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 39384 ||||||||| || || | ||| || || ||||| ||||| || | | ||| || | Sbjct 9831 TTTTTGGTACTCGGAGACCCTTTTTTCAAAGAAATTGGTTTTCCCCTGTAGTGAAATCAT 9772 Query 39385 TTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAAT 39444 ||||| |||||||| ||||| || | ||||||| ||||| | || | ||| || Sbjct 9771 ATCCATAAAATCAAATGGATTGGTAGAATTATATACTTTTTCACATTGAAGTTC---AAC 9715 Query 39445 CAAT---CTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTAT 39501 |||| || || | |||||||| | ||| |||||| || ||||| || || Sbjct 9714 CAATAGCCTGTCCGTTACAAATTCCAAATATTGGGTCATCAGTTTTGCGTTCATCCCAAT 9655 Query 39502 GAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTAT 39561 ||| | || ||||| | ||||| | |||||| ||| || || | ||| | ||||| Sbjct 9654 GAGGCTTACAGGTAGGGATTCCGTAATAAACTCGCGTTCTATATCCAAGGCATTTGTTAG 9595 Query 39562 TATCGATGTTACTACCTCAT----CACTCGGTGGATGCAATAAATGTT-TAAACATTAAG 39616 ||| ||| | ||| | ||| || || | | ||| | | || || Sbjct 9594 AATCTGTGTAATCCTCTCCTTGGGCACCTTGTTGACCAAGTGGTGGTTGTGCAAATGAAC 9535 Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 |||| | || ||||| | ||| ||||| | ||| ||||| || ||||| || | Sbjct 9534 --GGCGTAATCGCAATGCATGCCTTCATCACGGGAAATCAATTCATTGGAAAAAGTCAAC 9477 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 || ||||||| || | || || | |||||| |||| | ||||| || |||||||| Sbjct 9476 CCGGGCATTAACCCTCTTTTCTTCAACCAAAAAATGGAACAAAAAGCCCCGGAAAAGAAA 9417 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTATC 39796 || ||||| || || ||||| || | | || || | |||||| || | ||| Sbjct 9416 ATCCCTTCCACAGCGGCAAAGGCGATCAATCGTTCGGCAAAACTTGGGGAATCA---ATC 9360 Query 39797 CACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAG 39856 || | | |||||||| || || ||||| | || | | || ||||| | ||| Sbjct 9359 CATCTAAGCGCCCAATCCGCCTTTTTCTTGATGGCTGGAAAGTTCTCAATAGCCTGAAAA 9300 Query 39857 AGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCT 39916 || | |||||| | || || ||||| || ||||| ||||| || |||| Sbjct 9299 AGGATGTTTTTTTCCTTTTCGTCCTTTACATAGGTGTCTATCAACAGGGAGTAGGTTTCG 9240 Query 39917 GAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGT 39976 ||||||||||| || ||| ||||| ||||||||||| | | || || | | ||| Sbjct 9239 GAATGGATGTTCTCCATCATTATCTGGAATCCGTAAAAGAACTTGGCCTCCGAATATTGG 9180 Query 39977 ACCTC-TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAA 40035 || || | ||||||| | || |||||||||||||| || || ||||| |||||||| Sbjct 9179 ACTTCGTTCACAAAAT-TCTCGGCCAAATTTTCATTTACAATCCCATCGGATGCGGCAAA 9121 Query 40036 AAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTA---TTCCAGTC 40092 ||| ||||| | |||||| ||||| || ||| ||| | |||||| |||||||| Sbjct 9120 AAAGGCCAAGATATGTTTTATAAAGTAACGTTCGTCGTCACTTAATTTATCGTTCCAGTC 9061 Query 40093 ATTGATATCTTTTGA--TATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150 | |||| | ||| || ||| | || || || |||||||| | ||||| ||| Sbjct 9060 A--GATAAATCCTGATGTAAATCAATCTCCTCGGCGGTCCAAAAACAGGCCTCACATTTT 9003 Query 40151 TTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTAT 40202 |||||| | ||| | ||| ||| || || || || || |||||||||| Sbjct 9002 TTGTACCATTCCCACAAATCGTGATGTTCAATGGGGAATATTACAAATCTAT 8951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 685649266851600