Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_027334.1 Length=47800 Score E Sequences producing significant alignments: (Bits) Value seq11874 91.5 4e-14 >seq11874 Length=3931 Score = 91.5 bits (100), Expect = 4e-14 Identities = 232/349 (66%), Gaps = 37/349 (11%) Strand=Plus/Minus Query 33356 GGGGATCACCCGCTGATAATCGGGGTATGTCCCGTCGATCAGCTTCGATGCCAGCCGAAG 33415 |||||| ||||||| || |||||| | || |||||||||||||| | |||| | Sbjct 3233 GGGGATGACCCGCTCGTAGTCGGGGAAGGTGCCGTCGATCAGCTTGCTGGTCAGC--ACC 3176 Query 33416 GTCGCCCGCCTCGAGAACGATGCGGCTCT-------GGTCAATGGCGACCTGGACGGTCT 33468 ||||| | || ||| |||| ||| || ||| | |||| |||| | Sbjct 3175 GTCGCG----TTGAAGGCGAAGCGGATCTTGGTTTCGGACAAGGAAATCCTGATCGGT-T 3121 Query 33469 CGCCGGCCTTCGTCGCCTCGGCCATCATGCCGAACAGGCTGACCATCTTGCGCGGCACGA 33528 || ||| || ||||| || | || || | || || ||||||||||||||| Sbjct 3120 CGTCGGTCT------CCTCGATCAGCTTGTAGACCTCGCCCACAGTCTTGCGCGGCACGA 3067 Query 33529 TGATGCCGGCGAAATCGG--GCA--GGTTGTCTCGGGCCATGGCCAGCCGGGACAGGCGG 33584 | | ||||| | ||| ||| | | | | ||| || | | ||| | ||| ||| Sbjct 3066 TCACGCCGGGCATGCCGGTGGCACCGCTCGGCAGCGGC-ATCTCGACCCGAGCCAGCCGG 3008 Query 33585 TGGCCGTCGGTTGCTACGGCGA---------CGAGGGCGCC---TTCGTGCGGGTGCAGG 33632 ||||| ||||| |||||||| ||| || | |||| || |||||| Sbjct 3007 TGGCCATCGGTCGCTACGGCCCGCAAAACCTCGACCGCTTCGGTTTCGGCCGCATGCAGG 2948 Query 33633 TAGATGCCATTGAGGTAGTAGCGGGTTTCCTCGCTGGAGATCGCGAAGC 33681 |||||||| |||||||||||||||||||||||| | |||||||| |||| Sbjct 2947 TAGATGCCGTTGAGGTAGTAGCGGGTTTCCTCGGTCGAGATCGCAAAGC 2899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152572164104360