Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq10895 163 2e-35 >seq10895 Length=16309 Score = 163 bits (180), Expect = 2e-35 Identities = 398/597 (67%), Gaps = 16/597 (3%) Strand=Plus/Plus Query 43685 GAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTAC 43744 |||||| | ||| ||||| | || || ||| || |||| || | ||| || |||| Sbjct 8941 GAAAATAAGGATAGATTTGTAATATTCCCCATTGAACATCACGATTTGTGGGAATGGTAC 9000 Query 43745 AAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCA 43804 |||||| |||| | |||||||| || || || ||||||| | | || ||| | Sbjct 9001 AAAAAATGTGAGGCCTGTTTTTGGACCGCCGAGGAGATTGATTTACATCAGGATTTATCT 9060 Query 43805 CATTGGATTGC---ATTAAA--ACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGT 43859 | |||| | ||||| || || | || || || | | | | ||||| | Sbjct 9061 GACTGGAACGATAAATTAAGTGACGACGAACGTTACTTTATAAAACATA--TCTTGGCCT 9118 Query 43860 TTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAG 43919 ||||||| || ||| ||||| || ||||||||||||| |||| | | |||| Sbjct 9119 TTTTTGCCGCATCCGATGGGATTGTAAATGAAAATTTGGCCGAGAATTTTGTGAACGAAG 9178 Query 43920 TTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATT 43979 | |||| | || || | ||||| || || || || || || || || |||| Sbjct 9179 TCCAATATTCGGAGGCCAAGTTCTTTTACGGATTCCAGATAATGATGGAGAACATCCATT 9238 Query 43980 CGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAG--CATCG 44037 | |||| ||| || ||||||| || || | || || | | || || |||| Sbjct 9239 CCGAAACCTACTCCCTGTTGATAGACACCTATGTAAAGGACGAAAAGGAAAAAAACATCC 9298 Query 44038 ATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAA 44097 || || | || || || | | || || || || | || || || ||||| |||| Sbjct 9299 TTT--TTCAGGCTATTGAGAACTTTCCAGCCATCAAGAAAAAGGCGGATTGGGCGCTTAG 9356 Query 44098 ATGGATAAATTCAA-ATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAG 44156 |||||| |||| | | ||||| |||||| | |||| ||||| | |||||||| Sbjct 9357 ATGGATTGATTCCCCAAG----TTTTGCCGAACGATTGATCGCCTTTGCCGCTGTGGAAG 9412 Query 44157 GCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGC 44216 | ||||||||||| || | ||| |||| |||||||| |||||| |||| || |||| Sbjct 9413 GGATTTTCTTTTCCGGGGCTTTTTGTTCCATTTTTTGGTTGAAGAAAAGAGGGTTAATGC 9472 Query 44217 CTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATT 44273 | |||||||| ||||| ||||| || || |||||||||||| | |||||||||| Sbjct 9473 CCGGGTTGACTTTTTCCAATGAATTGATTTCCCGTGATGAAGGCATGCATTGCGATT 9529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396745434373450