Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq10895 86.0 5e-12 >seq10895 Length=16309 Score = 86.0 bits (94), Expect = 5e-12 Identities = 186/278 (67%), Gaps = 3/278 (1%) Strand=Plus/Minus Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662 |||||||| |||| ||||||| | ||| | | || || || |||||||| ||| Sbjct 11072 GGACATTCATTGGGGCACATTAAGGTCCAATCTTCATTGGCCTCCACGCGCTTCATGAAC 11013 Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722 ||||| || | ||| | ||||| |||||||| | || | ||||| | || Sbjct 11012 AAATCTGGAATCCACATGGCGTAGAACAGATCACGGGCACGCATTTCTTCCTTTCCGTGG 10953 Query 131723 AtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCC 131782 | || ||||| | |||||||| ||||| ||||||||||| || || | ||| | || Sbjct 10952 TTCTTCTTCAATTCCAAAAAGTCAAAAATATCCGCATGCCAAGGCTCTACATAAATGGCA 10893 Query 131783 ATTGCGCCTTTGCGCTTACCG---CCTTGATTAACATGACGAACCATGTTGTTGTATACG 131839 | ||||| ||||| ||| ||||||| ||| | || || ||| || |||| Sbjct 10892 AAACTTCCTTTTCGCTTCCCGCCTCCTTGATCAACGTAGCGTGCCGTGTCATTAAATACC 10833 Query 131840 CGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGT 131877 | | ||| || | | ||| |||| | |||||||| Sbjct 10832 CTTAGCATAGGGACAATACCATTGGAAGTACCATTGGT 10795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424174708919280