Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq83140 118 1e-21 seq15169 100 3e-16 >seq83140 Length=1468 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 53528 GCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAG 53587 |||||||||||| |||| || || || || |||||||| || |||||||||||||| ||| Sbjct 1449 GCCCGGTACGTCGACCAAGGAGGAGGCAAACGCAAGGGCTCCTTCGCCATCTACCTGGAG 1390 Query 53588 CCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAG 53647 || |||||| | ||| | | || || || || |||| ||| || || | || ||| Sbjct 1389 CCCTGGCACTCAGACCTCCTTGACTTCCTGGATTTGCGGAAGAACCACGGCAAGGAGGAG 1330 Query 53648 ATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTG 53707 | | || || || | ||| |||||||| ||||| |||||| | ||| Sbjct 1329 CACAGAGCGAGGGATCTCTTCTTCGGTCTCTGGATTCCTGACCTGTTCATGAGACGAGTG 1270 Query 53708 GAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCT 53757 || |||||| || ||| |||||||||||||||||||||| || || Sbjct 1269 AAGGAGGACGGAGACTGGACGTTGATGTGCCCGAACGAGTGCCCTGGGCT 1220 >seq15169 Length=4399 Score = 100 bits (110), Expect = 3e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 55796 GGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCC 55855 ||| ||||||| |||||| |||||| ||||||||| |||||| || | | ||| Sbjct 1097 GGTCCGTACATTGACCAGAGCCAGTCGCTGAACATCCACATGGAAGGCCCCACCTTCGCC 1156 Query 55856 AAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTAT 55915 ||| || ||| |||||||| ||||| ||| |||||||||||||||| || | |||||| Sbjct 1157 AAGCTGTCCTCCATGCACTTCTACGGATGGGAGAAGGGACTCAAGACCGGCGTCTACTAT 1216 Query 55916 CTGCGGAC 55923 || || || Sbjct 1217 CTCCGCAC 1224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546212611062000