Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq10895 132 5e-26 seq49863 127 2e-24 seq57105 116 4e-21 seq9473 111 2e-19 seq122735 98.7 1e-15 seq83140 98.7 1e-15 seq8271 95.1 1e-14 seq48996 93.3 5e-14 seq56386 91.5 2e-13 seq118334 89.7 6e-13 seq59511 84.2 2e-11 >seq10895 Length=16309 Score = 132 bits (146), Expect = 5e-26 Identities = 377/576 (65%), Gaps = 5/576 (1%) Strand=Plus/Minus Query 81179 CTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGA 81238 |||| || || || |||||||| | | ||| || | | ||| || |||||||| Sbjct 11074 CTGGACATTCATTGGGGCACATTAAGGTCCAATCTTCATTGGCCTCCACGCGCTTCATGA 11015 Query 81239 AAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCT 81298 | || || ||||| | |||| |||||| || ||| ||| || || | || | Sbjct 11014 ACAAATCTGGAATCCACATGGCGTAGAACAGATCACGGGCACGCATTTCTTCCTTTCCGT 10955 Query 81299 GGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGG 81358 |||| ||| || | |||||| | || ||||||||||| ||||| | ||| | || Sbjct 10954 GGTTCTTCTTCAATTCCAAAAAGTCAAAAATATCCGCATGCCAAGGCTCTACATAAATGG 10895 Query 81359 CGATCGACCCCTTGCGA---CGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATA 81415 | | || || || | ||| || || | ||||| || || || | ||||||| Sbjct 10894 CAAAACTTCCTTTTCGCTTCCCGCCTCCTTGATCAACGTAGCGTGCCGTGTCATTAAATA 10835 Query 81416 CACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCT 81475 | | | |||||||| ||||||| || ||| || ||||| | ||| || ||| Sbjct 10834 CCCTTAGCATAGGGACAATACCATTGGAAGTACCATTGGTACCGGCTATATATGATCCCG 10775 Query 81476 TGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCAC 81535 | || || || ||| || ||||| ||||| || || | | | || || | || Sbjct 10774 TAGCCCGAACATTGTGAATGGAAAGTCCGATTCCCCCCGCAGATTGGGAGATTTTCGCGG 10715 Query 81536 ACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAAC 81595 | | |||| ||| || ||||| || ||||| || || | |||||| | | | ||| | Sbjct 10714 TCTGCTTCAAGGTGTCGTAAATACCATCGATACTGTCGTCCTTCATGGCCAATAGGAAGC 10655 Query 81596 AGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGA 81655 || |||||||| || | | |||| ||||| || || || || || || ||| Sbjct 10654 AGGAGGACATCTGCGGCTTGGGCGTTCCGGAGTTGAAGAGGGTAGGTGTTGCATGGGTGA 10595 Query 81656 AATAACGGTTTGACATCAGGTCATAGGTTTCCTTGAC-GCGTGGAATATCGTCACCGTGA 81714 |||| ||||||||||| ||||||||||| || | | || ||||| | ||| Sbjct 10594 AATATTTTTTTGACATCAGCTCATAGGTTTCTATGGCAGAGT-CCATATCATTTAAGTGG 10536 Query 81715 ATACCGATAGCTACACGCATAAACATGTACTGGGGC 81750 || || | || || ||||| ||||| | ||||||| Sbjct 10535 ATTCCAACCGCAACGCGCATCAACATATGCTGGGGC 10500 >seq49863 Length=10164 Score = 127 bits (140), Expect = 2e-24 Identities = 264/385 (69%), Gaps = 21/385 (5%) Strand=Plus/Minus Query 24752 TGGCAAGGTGCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTA 24811 ||| ||||| |||||| ||| ||||| |||||||| || |||||||| || || || || Sbjct 10024 TGGAAAGGTACAGGAGGTGCCCCAGTCAGAGACCACCCCTTTTTATCCTCGTAGTCCCTA 9965 Query 24812 TGGGGTCTCAAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGAT 24871 || || |||| ||| || || ||||| ||| ||||| | || ||| |||| || Sbjct 9964 TGCCGTGGCAAAAATGTATGCCTATTGGATTACCGTAAACTATAGGGAAGCCTATGGTAT 9905 Query 24872 ATATGCATGCAACGGAATTCTGTTCAACCATGAGTCGGAGCGTCGGGGACCTGAA--TTT 24929 | ||| |||||||||||| | || || ||||| ||| | ||| || | || ||| Sbjct 9904 GTTTGCCTGCAACGGAATTTTATTTAATCATGAATCGCCGATTCGTGG--CGAAACTTTT 9847 Query 24930 GTTACACGAAAGATTAC-----TCTTGGTA--TTGACCATTGGATCAAGACAAGGGCACC 24982 || || |||| ||||| | |||| | | || ||| || ||| | | | Sbjct 9846 GTAACGAGAAAAATTACAAGAGCCGCGGTACGTATAGCACTGGGTC--TACAGGATAAAC 9789 Query 24983 TATTGAGCTGGGAAACCTAGATGCCAAACGTGATTGGGGGCATGCAGCCGACTACGTCGA 25042 ||| | ||||| || || ||||| ||||| ||||||||||| || ||||| || | Sbjct 9788 TAT--ATCTGGGCAATCTGGATGCAAAACGGGATTGGGGGCACGCCAAGGACTATGT--A 9733 Query 25043 CGCCATGTGGCGCATGCTCCAACAG---AATAAGCCAGAGGATTTTGTGATCGGCACCGG 25099 || ||| | | ||| ||| |||| || ||||||| |||| || |||| ||| || Sbjct 9732 CG-GATGATGTGGATGATCCTACAGGCAGATGAGCCAGAAGATTGGGTCATCGCCACAGG 9674 Query 25100 TCAGACGCATTCTATCAGGGATTTT 25124 | | || ||| | ||||||||| Sbjct 9673 TAAAACTACCTCTGTAAGGGATTTT 9649 >seq57105 Length=498 Score = 116 bits (128), Expect = 4e-21 Identities = 103/129 (80%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| || ||||| |||||||| |||||||| || ||| | Sbjct 369 AATGCAGATTTTCGTCAAGACTCTGACCGGGAAGACTATCACTCTTGATGTGGAGCCTTC 428 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| ||||| || ||||||| || ||||||||||||||||||||||| || || || Sbjct 429 TGACTCCATTGAGAACGTGAAGGCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGATCA 488 Query 27525 GCAGCGTCT 27533 |||||| || Sbjct 489 GCAGCGCCT 497 >seq9473 Length=1265 Score = 111 bits (122), Expect = 2e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || ||||| ||||| || ||||| || || ||| | Sbjct 1097 AATGCAGATCTTCGTGAAGACTCTCACCGGAAAGACGATCACTCTCGATGTGGAGCCCTC 1156 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| || | || | ||||| || || |||||||||||||| ||||| || || || Sbjct 1157 TGACTCTATCGAGAACGTCAAGGCAAAGATCCAGGACAAGGAGGGGATTCCCCCCGATCA 1216 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGA 27560 ||||||||| || || || || ||||| |||||||| Sbjct 1217 GCAGCGTCTGATCTTCGCCGGAAAGCAGCTCGAGGA 1252 >seq122735 Length=1630 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || |||||||| || ||| ||| |||||||| || || ||||| |||||||| | ||| Sbjct 260 AAGTTGAAGGCAAAGATTAAGGCAAAGGAGGGGATCCCACCAGATGAGCAGCGTTTGATT 319 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 ||||| || ||||| |||||||| | |||| || | ||||| || || || | || Sbjct 320 TTTGCAGGAAAGCAGCTCGAGGACGGATGTACGCTCTCCGACTACAACGTTCAGGATGAG 379 Query 27598 TCCACTCTTCATCT 27611 ||||||||||| || Sbjct 380 TCCACTCTTCACCT 393 >seq83140 Length=1468 Score = 98.7 bits (108), Expect = 1e-15 Identities = 314/480 (65%), Gaps = 9/480 (2%) Strand=Plus/Plus Query 80928 CACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGT 80987 |||||| |||| ||| ||||||| ||||| ||||| | || || ||||| || Sbjct 973 CACCTCATCAGGGGATGTGTACTCGACAATTTCAGTGCAGAGGTTGGATGACTTGATGCA 1032 Query 80988 ACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGT 81047 |||||||| | ||||| ||||| |||||| ||||| ||||| |||||| ||||| Sbjct 1033 CCCCAGGTTCTGTTGGTTGGACTTTCTGTTGCACGCGTCTTTGTACAGCATGTAGGGGGT 1092 Query 81048 ACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTT 81107 ||||||||| | ||| || || || | ||| | | | ||| | || ||| Sbjct 1093 ACCGGTCTCAATCTGGCTCTCCAGAATTTTGAACCACAGCCACTGGGCCCTCACGGTCTT 1152 Query 81108 GCGGAATTTGCCT-TCGGC-CACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGA 81165 | ||||| || | | || | | | || | || |||| | || Sbjct 1153 CCTTCCCCTGCCTGTCTTCTCGAATTCCT--CATACTTTCTCTCAAACTCCTCCCCCCAG 1210 Query 81166 AGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCT 81225 ||||| || | ||||||||||| |||||||||| |||||| ||| | || Sbjct 1211 CATTCAGACAGCCCAGGGCACTCGTTCGGGCACATCAACGTCCAGTCTCCGTCCTCCTTC 1270 Query 81226 ACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGC-GGCAGCGCGC 81284 || ||||||| |||||| |||||||| || ||| || || | || | | Sbjct 1271 ACTCGTCTCATGAACAGGTCAGGAATCCAGAGACCGAAGAAGAGATCCCTCGCTCTGTG- 1329 Query 81285 CTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGG 81344 |||||| | || ||||| ||||| || || ||||| | || ||| | ||||| || Sbjct 1330 CTCCTCCTTGCCGTGGTTCTTCCGCAAATCCAGGAAGTCAAGGAGGTCTGAGTGCCAGGG 1389 Query 81345 CTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGC 81401 |||||| || | ||||| || |||||||| | || || |||| |||||| ||||| Sbjct 1390 CTCCAGGTAGATGGCGAAGGAGCCCTTGCGTTTGCCTCCTCCTTGGTCGACGTACCGGGC 1449 >seq8271 Length=1924 Score = 95.1 bits (104), Expect = 1e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 |||||||| || ||||||||||||||||| || || || |||||||| || || ||||| Sbjct 1351 AAGGCTAAGATCCAGGACAAGGAGGGAATCCCCCCCGATCAGCAGCGCCTTATCTTTGCG 1292 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGG 27595 || ||||| |||||||||| | || || | ||||| || |||| |||| Sbjct 1291 GGCAAGCAGCTCGAGGATGGGAGAACTCTTTCTGACTACAACATCCAGAAGG 1240 >seq48996 Length=1832 Score = 93.3 bits (102), Expect = 5e-14 Identities = 154/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 27413 TCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCA 27472 ||||||||||||| | || || ||||| || || || | || || | | ||| || Sbjct 404 TCTTTGTCAAGACTTTGACAGGAAAGACGATCACCCTGCAAGTGGAACCCGACGATTCCA 463 Query 27473 TTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTC 27532 | || || | || | ||||||||||||||||||||||| || || |||||| | | Sbjct 464 TCCCACATGTCAAAAATTTGATTCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGAGAC 523 Query 27533 TAATTTTTGCTGGTAAGCAACTCGAGG--ATGATCGTACCCTAGCAGACTATAATGTCCA 27590 | || |||||||| || | || |||| || || ||| ||| | || || || | || Sbjct 524 TGATCTTTGCTGGGAAAAAGCTTGAGGACATTAT-GTA-CCTGGATGATTACAACATTCA 581 Query 27591 AAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGG 27629 | ||| ||||| || ||| | || ||||| ||||| || Sbjct 582 GACGGAGTCCACCCTCCATTTGGTTTTGCGGCTTCGTGG 620 >seq56386 Length=466 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 27505 GAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGAT 27564 ||||||||||| || || |||||||| || || ||||| || ||||| || ||||||| Sbjct 466 GAGGGAATTCCCCCTGATCAGCAGCGCCTCATCTTTGCAGGCAAGCAGCTTGAGGATGGG 407 Query 27565 CGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | || || | ||||| || |||| |||||||||||||| ||||| || Sbjct 406 AGAACGCTGTCTGACTACAACATCCAGAAGGAATCCACTCTCCATCTGGT 357 >seq118334 Length=438 Score = 89.7 bits (98), Expect = 6e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || || |||||||||||||| |||||||| || ||| | Sbjct 331 ATGCAGATTTTCGTGAAAACTCTGACCGGCAAGACTATCACTCTTGATGTCGAGCCTTCC 390 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAAT 27512 || ||| | |||| ||||||| || |||||||||||||||||||| Sbjct 391 GACTCCATCGAAAATGTGAAGGCGAAGATTCAGGACAAGGAGGGAAT 437 >seq59511 Length=2170 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 64760 GGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTT 64819 |||| |||||| | || | |||||| || ||| | || |||||||| |||||| |||| | Sbjct 1577 GGTCTTTCTGTGCAATCTACTGGCTGAAGAAGAGAGGTCTGATGCCCGGTCTGACGTTCT 1518 Query 64820 CGAACGAGCTGATCTCTCGGGACGAGGGGCTCCA 64853 | |||||||||||| ||| |||||||| || || Sbjct 1517 CCAACGAGCTGATCAGTCGCGACGAGGGTCTGCA 1484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569264664592800