Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq37644 131 1e-25 seq57105 100 2e-16 seq118334 86.0 5e-12 seq48996 82.4 7e-11 >seq37644 Length=6317 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| | ||||||||||||||||| ||| | | ||| | || || ||||| ||| Sbjct 4332 ATGCAGATTTACGTAAAAACTCTGACCGGGAAGACGGTCACTTTAGATGTTGAACCTTCC 4391 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||||| ||||| ||| ||| |||||||||||||||||||||| | || || ||||| Sbjct 4392 GACTCAATTGAAGCGGTGAAAGAAAAAATTCAAGACAAAGAAGGGACCCCGCCTGATCAG 4451 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| ||||| ||| | || || | || | ||||| ||||| Sbjct 4452 CAGAGACTTATCTTCGCAGGCAAGCAACTTGAGGATGGGCGAACTCTCTCCGACTACAAT 4511 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 ||| | ||||| || ||| | | |||||| Sbjct 4512 ATTGAGAAGGAATCCACCCTCCGCTTGGTT 4541 >seq57105 Length=498 Score = 100 bits (110), Expect = 2e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||| ||| |||| |||||||| ||||| || || Sbjct 370 ATGCAGATTTTCGTCAAGACTCTGACCGGGAAGACTATCACTCTTGATGTGGAGCCTTCT 429 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||||| ||||||| || || || ||||| ||||| || || || || || ||||| Sbjct 430 GACTCCATTGAGAACGTGAAGGCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGATCAG 489 Query 27108 CAGCG 27112 ||||| Sbjct 490 CAGCG 494 >seq118334 Length=438 Score = 86.0 bits (94), Expect = 5e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||||||||||||||| |||| |||||||| || || || ||| Sbjct 331 ATGCAGATTTTCGTGAAAACTCTGACCGGCAAGACTATCACTCTTGATGTCGAGCCTTCC 390 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCAT 27094 ||||| || || | || || || ||||| ||||| || || || Sbjct 391 GACTCCATCGAAAATGTGAAGGCGAAGATTCAGGACAAGGAGGGAAT 437 >seq48996 Length=1832 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 ||||| || ||| |||| || ||| | || || || |||||||||| ||| || || Sbjct 406 TTTGTCAAGACTTTGACAGGAAAGACGATCACCCTGCAAGTGGAACCCGACGATTCCATC 465 Query 27057 G-AGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTT 27115 | ||| ||||| | ||||| ||||| || || || || || ||||| ||| | | Sbjct 466 CCACATG-TCAAAAATTTGATTCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGAGACT 524 Query 27116 AATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAA 27175 || | || || ||| | | || |||| | | | | |||||||||||||| | Sbjct 525 GATCTTTGCTGGGAAAAAGCTTGAGGACATTATGTACCTGGATGATTACAACATTCAGAC 584 Query 27176 GGAGTCGACCTTACATTTGGTTTTGCG 27202 |||||| ||| | |||||||||||||| Sbjct 585 GGAGTCCACCCTCCATTTGGTTTTGCG 611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434120922748800