Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq132084 87.8 7e-13 >seq132084 Length=12927 Score = 87.8 bits (96), Expect = 7e-13 Identities = 200/295 (68%), Gaps = 7/295 (2%) Strand=Plus/Minus Query 7282 GTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATGCCC 7341 || |||||||||||| |||| |||||| | || | || ||||||| |||| || | Sbjct 9969 GTCAACAAAGTCATTTTGGTCGGTAACCTGGGGCGCGATCCGGAAATCCGCAGCACTCAG 9910 Query 7342 AACGGCAAT-GCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAGCA 7400 |||||| || || ||||| || | |||| ||| || | |||| || | Sbjct 9909 GACGGCACCCGCATTG-CCAACCTCTCGGTCGCGACCTCGGAAACCTGGCGCGATCGTAA 9851 Query 7401 GACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTC---GGTCGCCT 7457 ||||| ||| | || ||| | |||| ||||||||||| ||||| | || Sbjct 9850 CTCCGGCGAGCGCCGCGAGCGCACTGAGTGGCACCGCGTGGTTATCTTCAACGAAAAGCT 9791 Query 7458 GGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGG-CAGCC 7516 | || | |||| |||||||||||||||| ||| || |||| ||||||| |||| Sbjct 9790 CTCCGAAGTGGCCGAGAAGTACCTGCGCAAGGGCTCCAAGATCTATATCGAAGGACAGCT 9731 Query 7517 TGCGCACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGT 7571 | | |||||||||||| | ||| |||||||| || || || || ||||| Sbjct 9730 T-CAAACCCGCAAGTGGACTGACCAGTCGGGCCAGGATCGCTATACGACAGAGGT 9677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194479835912180