Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq13327 470 2e-127 >seq13327 Length=3816 Score = 470 bits (520), Expect = 2e-127 Identities = 639/890 (72%), Gaps = 6/890 (1%) Strand=Plus/Minus Query 176203 TGTTTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCA 176262 ||||| || | ||| ||| | || ||||| || || ||||| || || ||||| || ||| Sbjct 2735 TGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGCCA 2676 Query 176263 GTAGCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCA 176322 || |||| ||||| || || ||||| || || ||||||||||| || || || || ||| Sbjct 2675 GTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTTCA 2616 Query 176323 AACGCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTC 176382 || || || || | || || || | | || || || |||| ||||| | Sbjct 2615 AATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGATTG 2556 Query 176383 TACAATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTAC 176442 || || |||||||| |||||| |||||||| | || ||| | ||||| | || | || Sbjct 2555 TATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCATAT 2496 Query 176443 ATGGGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCA 176502 | || || | || ||| | |||||| | |||| ||||||||||| || | || || Sbjct 2495 CTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAGCT 2436 Query 176503 TACTCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGA 176562 | |||||||||||| | ||||| ||| || || || || || ||| |||| |||||| Sbjct 2435 TTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAGGA 2376 Query 176563 TCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTC 176622 ||||| || ||||| |||||||| || ||||| || ||||||||||| ||| | |||||| Sbjct 2375 TCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTATTC 2316 Query 176623 CAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTT 176682 || |||||||| || || |||||||||| ||||| ||| |||||| ||||| || ||| Sbjct 2315 CAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTATTT 2256 Query 176683 GGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTT---CTTCACTTGTTAGA 176739 || |||||| | || || ||||| ||| | | ||||| | ||| | || || Sbjct 2255 GGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTA-- 2198 Query 176740 GAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACA 176799 ||| | ||| | ||||||| || || || || ||||||||||| ||| | || ||| Sbjct 2197 -TGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACA 2139 Query 176800 TACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTC 176859 || || || ||||| || ||||| ||||| || ||||| ||||| || | || ||| Sbjct 2138 TATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTT 2079 Query 176860 AATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTT 176919 ||||||||| | | | ||||||||||||||| | || || ||| | ||||| || Sbjct 2078 AATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTA 2019 Query 176920 ACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCT 176979 || |||||||| || | || ||||| ||||| || || || ||||| |||||||| || Sbjct 2018 ACAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCA 1959 Query 176980 GTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAAC 177039 || | || || || ||| | | || | |||||| | || |||||||| Sbjct 1958 ATCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAAT 1899 Query 177040 CTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGA 177089 || || |||||||| ||||| |||||||| || ||||| ||||| || || Sbjct 1898 CTAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGA 1849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602387817580800