Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_028677.1 Length=46596 Score E Sequences producing significant alignments: (Bits) Value seq16255 80.6 8e-11 seq6041 80.6 8e-11 >seq16255 Length=2010 Score = 80.6 bits (88), Expect = 8e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 1708 GTAGCTCAATTGGATAGAGCCCCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTC 1767 ||||||||| ||| |||||| |||||||||||| |||| || |||||||||||||||||| Sbjct 1888 GTAGCTCAACTGG-TAGAGCACCGGTCTCCAAAACCGGGGGCTGGGGGTTCGAGTCCCTC 1830 Query 1768 CGGGCCTGC 1776 | ||||| Sbjct 1829 CACTCCTGC 1821 >seq6041 Length=15754 Score = 80.6 bits (88), Expect = 8e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 1708 GTAGCTCAATTGGATAGAGCCCCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTC 1767 ||||||||||||| ||||| |||||||||||| |||| ||||| ||||||||||||||| Sbjct 173 GTAGCTCAATTGGC-AGAGCACCGGTCTCCAAAACCGGGGGTTGTGGGTTCGAGTCCCTC 231 Query 1768 CGGGCCTGC 1776 | ||||| Sbjct 232 CACTCCTGC 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148726075465240