Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_028686.1 Length=166313 Score E Sequences producing significant alignments: (Bits) Value seq606 105 7e-18 seq1150 86.0 7e-12 >seq606 Length=5396 Score = 105 bits (116), Expect = 7e-18 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 48830 GATAACGTCGCGCTGCTGTTCCGACGTCAGGGAGTTGAAGCGTACCGCGTAGCCGGAAAC 48889 ||||||||| |||||| | ||||| | ||||| || || |||||||| || Sbjct 3321 GATAACGTCTTCCTGCTGGGCGCGGGTCAGCTTGATGAAGTTGACGGCATAGCCGGAGAC 3262 Query 48890 ACGAATGGTCAGCTGCGGATATTTTTCCGGATGCTCAACCGCGTCCAGCAGAGTTTCACG 48949 |||||||||||||||||||| || ||||||||||| | ||| |||||||| ||||| || Sbjct 3261 CCGAATGGTCAGCTGCGGATACTTCTCCGGATGCTCCATCGCCTCCAGCAGCGTTTCCCG 3202 Query 48950 ACGCAGCACGTTAACGTTCAGGTGCTGACCGCC 48982 || ||||| ||||| | || || ||||| Sbjct 3201 GTTCAAGACGTTGACGTTGATATGGTGGCCGCC 3169 >seq1150 Length=48029 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 57450 AGGATTCGAACCTTCGACCTGCGGATTAGAAGTCCGCTGCTCTATCCAACTGAGCTA 57506 ||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||||| Sbjct 19344 AGGATTCGAACCTGCGACCTACGGATTAGAAGTCCGTTGCTCTATCCAGCTGAGCTA 19400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531097976545200