Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_028876.1 Length=109800 Score E Sequences producing significant alignments: (Bits) Value seq43861 96.9 2e-15 seq19149 93.3 3e-14 >seq43861 Length=3806 Score = 96.9 bits (106), Expect = 2e-15 Identities = 191/279 (68%), Gaps = 9/279 (3%) Strand=Plus/Plus Query 96586 GTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTATCGGT 96645 ||| ||||| |||| || || ||| | || |||| |||||||| ||||| ||| | Sbjct 2677 GTCGCCCATGCCCAGCAGGTGTTCGCCGCCCGACTCGCCCAGGATCGTGCGGCTGTCGAT 2736 Query 96646 GAGTGATGCTG---TGGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGT 96702 || || || ||| || || | | | ||| | |||| ||||| || || Sbjct 2737 CT-TGCTGGTGACCTGG--AAGGAAATGCGGGTCGGGAAATTGGCCTTGATGGTACCGGT 2793 Query 96703 GACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATACCGGCTGCGCGCGC 96762 || || ||||| ||||| ||||| ||||||| || | || || ||||| |||||||| Sbjct 2794 GATGACGTCCACCGAGGGGCGCTGGGTCGCCATGATCAAGTGGATGCCGGCCGCGCGCGC 2853 Query 96763 CTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAG 96822 | |||| |||| ||| || ||||| || || |||| | || ||| ||| || Sbjct 2854 CATCTGCGCGAGGCGCTGGATCGCCGCCTCCACCTC---CTTGCCGGCGACCAGCATCAG 2910 Query 96823 GTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGGAG 96861 ||| || | |||||||| | |||||||||||||| || Sbjct 2911 GTCCGCCATCTCGTCGACGATCACCACGATGTAGGGCAG 2949 Score = 96.9 bits (106), Expect = 2e-15 Identities = 192/278 (69%), Gaps = 10/278 (4%) Strand=Plus/Plus Query 96877 GTGGCGCACGCCG-GCTTCCTGCATCTGCCGGTACCGGTCATCCATCTC---CACGGTGA 96932 || |||||||||| || || ||| |||||| || || ||||| || ||||| Sbjct 3082 GTTGCGCACGCCGAGCCGGCT-CATGGCCCGGTAGCGCTCCTCCATTTCGCGCACGGC-- 3138 Query 96933 GCCACCGCAGCGTCTTAACCGCCTCGTCGGGCTCGGTGACCACCGG-CTGCAAAAGGTGG 96991 |||| |||| || |||| | |||||||| |||||||| ||| | || ||| Sbjct 3139 -CCACTTGAGCGCGACCACGGCCTTCTTCGGCTCGGTCACCACCGGACTG-AGCAGATGG 3196 Query 96992 GGGATACCGTTGTACGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGTTTGACC 97051 || || || | ||| | | ||||||| ||||||||| |||| |||||||| | | Sbjct 3197 GGAATCCCATCGTAGACGCTCAGTTCCAGCATCTTCGGATCGACCATGATGAAGCGGCAC 3256 Query 97052 CGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTA 97111 | || || | ||||| |||| ||||| | ||| | ||||| | || ||||| Sbjct 3257 CTGTCCGGCCCGTGCCGGTACAGCAGCGAAACGATCATGGCGTTGACGGAGACCGACTTG 3316 Query 97112 CCTGATCCGGTGGCGCCAGCCACCAGCAGGTGCGGCAT 97149 || || ||||| | || ||||| |||||||||||||| Sbjct 3317 CCCGAACCGGTCGTACCGGCCACAAGCAGGTGCGGCAT 3354 >seq19149 Length=5546 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 14/207 (7%) Strand=Plus/Plus Query 96950 ACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTACGGG 97009 ||||||| | |||||||| |||||||| ||| ||||||||||| |||| || Sbjct 1617 ACCGCCTTCTTCGGCTCGGTCACCACCGGGGCCAAGAGGTGGGGGATGCCGTCATAGACC 1676 Query 97010 GTGAGTTCCACCATCTTCGGGTCGATCATGATGAGTTTGACCCGATCAGGATT--GGC-- 97065 | || |||| |||||| ||||||| |||||||| ||| |||| || ||| Sbjct 1677 GACAGCTCCAGCATCTTGGGGTCGACCATGATGAACTTG-------CAGGCTTCCGGCCC 1729 Query 97066 ---TCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTACCTGATCCGGT 97122 |||||||||| || | | ||| | |||||| ||||| || || ||||| Sbjct 1730 CAGGCGGTAGAGCAGCGACAGGATCATGGCGTTGATCGCCACCGACTTGCCCGAACCGGT 1789 Query 97123 GGCGCCAGCCACCAGCAGGTGCGGCAT 97149 || ||| |||||||||| ||| ||||| Sbjct 1790 GGTGCCGGCCACCAGCACGTGGGGCAT 1816 Score = 84.2 bits (92), Expect = 2e-11 Identities = 173/257 (67%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 96596 CCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTATCGGTGAGTGATGCT 96655 |||| ||||| ||||| || ||| ||||||| |||||| ||| | || | Sbjct 1149 CCCAGCAGCTGTTCGGCACCCTGTTCGCCCAGGATGGTCCGGCTGTCGATCTTGGAGGTC 1208 Query 96656 GTGGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACG 96715 | ||| || | || | ||| | ||||| ||||| ||| |||| || || || Sbjct 1209 ACGTGGAAGGAAATCCGCGTCGGGAAGTTGGCCTTGATGGTGCCGGTGATGACGTCGACC 1268 Query 96716 GAGGGCCGCTGCGTCGCCAGGACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATG 96775 ||||| ||||| || || | || || || || ||||| || |||||| |||| || | | Sbjct 1269 GAGGGGCGCTGGGTGGCGACGATCAGGTGGATGCCGGCGGCCCGCGCCATCTGCGCCAGG 1328 Query 96776 CGGACAATGTTGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCG 96835 || || ||| || || || |||| | || ||| ||| ||||| || |||||| Sbjct 1329 CGCTGGATCGCGGCTTCCACGTC---CTTGCCGGCGACCAGCATCAGGTCGGCCAGTTCG 1385 Query 96836 TCGACCACTACCACGAT 96852 ||||| | |||||||| Sbjct 1386 TCGACGATCACCACGAT 1402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 350607267197490