Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_028878.1 Length=76271 Score E Sequences producing significant alignments: (Bits) Value seq20236 89.7 3e-13 seq86054 84.2 1e-11 >seq20236 Length=2105 Score = 89.7 bits (98), Expect = 3e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 66123 ATGGGTGCCCCCACAAGGGATCGAACCTTGGACCCGATGATTAAAAGTCACCTGCTCTAC 66182 || |||| | ||||||| |||||||||||||||| ||||||| ||||| ||||||||| Sbjct 1978 ATTGGTGGGCGCACAAGGACTCGAACCTTGGACCCGCTGATTAAGAGTCAGCTGCTCTAC 1919 Query 66183 CAACTGAGCTAT 66194 |||||||||||| Sbjct 1918 CAACTGAGCTAT 1907 >seq86054 Length=17788 Score = 84.2 bits (92), Expect = 1e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 66126 GGTGCCCCCACAAGGGATCGAACCTTGGACCCGATGATTAAAAGTCACCTGCTCTACCAA 66185 |||| | ||||||| |||||||||||||||| ||||||| ||||| ||||||| |||| Sbjct 12117 GGTGGGCGCACAAGGACTCGAACCTTGGACCCGCTGATTAAGAGTCAGCTGCTCTGCCAA 12176 Query 66186 CTGAGCTAT 66194 ||||||||| Sbjct 12177 CTGAGCTAT 12185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243506283588880