Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_028980.1 Length=62181 Score E Sequences producing significant alignments: (Bits) Value seq18646 131 7e-26 seq5209 116 1e-21 >seq18646 Length=3619 Score = 131 bits (144), Expect = 7e-26 Identities = 171/230 (74%), Gaps = 10/230 (4%) Strand=Plus/Plus Query 33035 CCCTCACCTTCGAGGGCCGGACCTACCGCGAAGTGG-ACGCCCGGGCGCTGTGGGACGCG 33093 |||| ||||||| |||| | ||||| | || | || | || |||||||||||||||| Sbjct 1025 CCCTGACCTTCGCCGGCCAGCCCTACGG-GACGCGGCAGGCGCGGGCGCTGTGGGACGGC 1083 Query 33094 ATCATGCGCGGGACCT--GGGACTGGGCGGAGCCTGGGGTGCTGTTCATCGACGCGATCA 33151 |||||||| | ||||| | ||| | ||||| || ||| | || |||||| ||||| Sbjct 1084 ATCATGCGTGCGACCTACGAGACCAG--CGAGCCGGGTGTGATCTTTATCGACAGGATCA 1141 Query 33152 ACCGCATGAACAACCTCTGG--TACTGCGAGACCATCGCCGCCACCAACCCCTGCGGTGA 33209 |||| ||| | || |||| |||||||| |||| |||||| ||||| ||||| || Sbjct 1142 ACCGGCTGA--ATCCCCTGGCCTACTGCGAAGACATCCGCGCCACGAACCCTTGCGGAGA 1199 Query 33210 GCAACCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCTTCAACTTGG 33259 ||| ||||| ||||| ||||| ||||| || | ||||| | ||| ||| Sbjct 1200 GCAGCCGCTGCCGCCTTACGGCGCCTGTCTGCTCGGCTCGCTGAACCTGG 1249 >seq5209 Length=31209 Score = 116 bits (128), Expect = 1e-21 Identities = 130/174 (75%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 33081 GCTGTGGGACGCGATCATGCGCGGGACCTGGGACTGGGCGGAGCCTGGGGTGCTGTTCAT 33140 ||| ||||||| ||||||| || ||| | | || ||||| || ||| | ||||| Sbjct 10091 GCTCTGGGACGGCATCATGCACGCCACCCACGCCGCTGCCGAGCCGGGCGTGATCTTCAT 10150 Query 33141 CGACGCGATCAACCGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGCCACCAACCC 33200 |||| ||||| | |||||||| ||||||||||||||| |||||||||||| Sbjct 10151 CGACCGCATCAATCAGCGCAACAACCTGCACTACTGCGAGACCATCAGCGCCACCAACCC 10210 Query 33201 CTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCTTCAA 33254 ||| || || || ||||| |||||||| || |||||| || ||||||| |||| Sbjct 10211 CTGTGGCGAACAGCCGCTGCCGCCCTATGGCGCCTGCCTGCTGGGCTCGATCAA 10264 Score = 84.2 bits (92), Expect = 9e-12 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 33630 CGAGGACGTGCGGGACGCCATCGCCAAATACGGCATCCGCAACTCCCACCTCACTTCCAT 33689 |||||| | || | | ||||||| |||||||||||||| ||| |||| ||| | Sbjct 10640 CGAGGAGATCCGCGCGGGCATCGCCCGCCACGGCATCCGCAACGCCCTGGTCACCTCCGT 10699 Query 33690 CGCCCCGACCGGGACCATCAGCCTGTGCGCCGACAACGTCAGCTCCGGGATTGAGCCGGT 33749 ||| |||||||| |||||| ||| |||| |||| || ||||||| | |||||||| Sbjct 10700 CGCGCCGACCGGCACCATCTCGCTGCTGGCCGGCAACATCTCCTCCGGGCTGGAGCCGGT 10759 Query 33750 GTTC 33753 |||| Sbjct 10760 GTTC 10763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198511201246540