Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq25330 96.9 1e-15 seq75276 84.2 7e-12 >seq25330 Length=3039 Score = 96.9 bits (106), Expect = 1e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 18119 CAATCGGGTCAATGAGATCGCCGAGATCACCTCCGGCTTGAAG-TCGCTCGCCAGAGAGC 18177 |||||| ||| | || || ||| |||||| | | ||||| ||| |||| | || | Sbjct 285 CAATCGCGTCCAGGAAGTCAGCGAAATCACCCGGGCCCTGAAGATCG-TCGCGAAGGAAC 227 Query 18178 TCGATATCGCCGTCGTTTTGCTGTCGCAGCTTAATCGAGCAGTCGAGAGCAGAGAGGATA 18237 | | || ||||| | ||||| |||||| || || || | | | || || | Sbjct 226 TGAACGTCCCCGTCCTGGCTCTGTCCCAGCTTTCACGTCAGGTGGAAAACCGTGACGACA 167 Query 18238 AGCGACCTCTTCTCTCAGACCTTCGCGATTCCGGTGCGATCGAGCAGGACGCCGACATGA 18297 |||| |||| ||||| ||||| ||||| ||||| ||||||||||||| |||||| || Sbjct 166 AGCGTCCTCAGCTCTCGGACCTGCGCGAATCCGGGTCGATCGAGCAGGATGCCGACGTGG 107 Query 18298 TCGCGTTCTTGTTCCGTGAGGCCTACTACCTCGAACGCGa 18337 | | ||| | | ||||||| ||||||||| || ||||| Sbjct 106 TGACCTTCATCTATCGTGAGGACTACTACCTGGAGCGCGA 67 >seq75276 Length=6152 Score = 84.2 bits (92), Expect = 7e-12 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 21154 GTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATCCTGT 21213 || |||||||||||||||||| ||||||||||| ||||||||||||| ||||||| Sbjct 2 GTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGCAGGTTCAAATCCTGA 61 Query 21214 CTCCGCAACCA 21224 | ||||||||| Sbjct 62 CCCCGCAACCA 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162241690940420