Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_029079.1 Length=75339 Score E Sequences producing significant alignments: (Bits) Value seq1485 253 1e-62 seq53971 244 5e-60 >seq1485 Length=10108 Score = 253 bits (280), Expect = 1e-62 Identities = 519/763 (68%), Gaps = 9/763 (1%) Strand=Plus/Plus Query 66089 CATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGG 66148 |||| |||||||||| | | |||| ||| || || ||||| || ||| | || Sbjct 3098 CATTTCCACCGGCTCGCTGGGCTTGGATATCGCGCTCGGGATCGGCGGCGTCCCCCGCGG 3157 Query 66149 CCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGC 66208 || | || || ||||||||||| ||||| || || ||| | || ||| || ||| Sbjct 3158 GCGCATTGTCGAGATCTACGGCCCGGAATCCTCCGGAAAGACCACCCTGGCGCTGCACAT 3217 Query 66209 GGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCTGCCTACATCGACGCTGAGCACTCCCT 66268 | ||| | || ||||| ||||| || | || || | | |||| |||||||| | | Sbjct 3218 CGCCGCCGAGGCTCAGAAAGCCGGCGGAACGGCAGCTTTCGTCGATGCTGAGCATGCTTT 3277 Query 66269 GGACCCTGAG-TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGC 66327 |||||| ||| || || | | ||| ||||| || ||||| | || || | |||| Sbjct 3278 GGACCC-GAGCTATGCGACGAAGCTGGGTGTCGATATCGACGAGCTGCTGATCAGCCAGC 3336 Query 66328 CGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGT 66387 |||| | |||||||||||| ||||||| | ||| || || || |||| | | Sbjct 3337 CGGATGCCGGCGAGCAGGCCTTGGAGATTGCCGACACGCTGGTGCGCTCCGGCGCGGTCG 3396 Query 66388 CCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACA 66447 | | | || | ||||| || ||||| || |||||||| ||||| ||||| ||||| | Sbjct 3397 ACGTGCTGGTGATCGACTCCGTTGCGGCGCTCGTGCCGCGGGCCGAACTCGAGGGCGAGA 3456 Query 66448 TCGGGGA-CAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTC 66506 | || || ||| | | || ||||| |||||||| ||| || || |||||||||| Sbjct 3457 TGGGCGATCAGATGCCT-GGACTGCAGGCGCGCCTGATGAGCCAAGCTCTGCGCAAGCTG 3515 Query 66507 ACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAG 66566 ||| | | ||||||| || |||| || | ||| |||||||| | || |||| Sbjct 3516 ACCTCCTCGATCTCCAAGTCCCACACCCTTGTGATCTTCATCAACCAGATCCGTATGAAG 3575 Query 66567 ATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTC 66626 |||||| | || | |||| ||| || ||| | |||||||| || |||| |||| Sbjct 3576 ATCGGCGTCATGTTCGGGAGCCC---CGAAACAACCTCTGGCGGCAACGCGTTGAAGTTC 3632 Query 66627 TACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCT 66686 || |||| || || | ||| | || || |||| | ||||| ||||| | Sbjct 3633 TATTCCTCGGTTCGTCTCGATATTCGGCGGATCGGTGCGATCAAGGACCGCGATACCGTC 3692 Query 66687 GTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAAT 66746 |||||||||| || || || || || ||||||||||||||||| |||||| || Sbjct 3693 GTCGGCAACCAGACGCGCGTCAAAGTGGTCAAGAACAAGCTGGCTCCGCCGTTTCGGGTC 3752 Query 66747 GCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCGACCT 66805 | |||||| || |||||||| |||| ||||| | || || |||| | ||||| || Sbjct 3753 GTGGAGTTCGATATCATGTACGGGCAGGGGATCTC-CAAGACGGGCGAATTGCTCGATCT 3811 Query 66806 GGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTC 66848 | || | ||| | ||| ||||||| || ||||||||| Sbjct 3812 CGGAGTTCAGGCCGGCGTCGTGGAGAAGTCCGGAGCCTGGTTC 3854 >seq53971 Length=16181 Score = 244 bits (270), Expect = 5e-60 Identities = 498/732 (68%), Gaps = 17/732 (2%) Strand=Plus/Plus Query 66124 TGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAG 66183 |||||||||| || ||| | |||||||| || || |||||||| || ||| ||| | Sbjct 6828 TGGGCATCGGCGGCCTGCCGCGCGGCCGGGTCGTCGAGATCTACGGGCCGGAAAGTTCCG 6887 Query 66184 GGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCTG 66243 | || | || ||| || || | |||||| | || ||||| |||| || | | || Sbjct 6888 GCAAAACGACCCTGGCGCTGCATGTGGTGGCTGAGGCGCAGAAAACCGGCGGGACCTGTG 6947 Query 66244 CCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACC 66303 ||| |||||| || ||||| | |||| || | |||||| | ||||| || || Sbjct 6948 CCTTCATCGATGCCGAGCATGCGATGGATCCGGTTTACGCCGCGAAACTCGGCGTCAACG 7007 Query 66304 TCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACC 66363 |||| | | |||| |||||| || | |||||||||||||||||||||| |||| Sbjct 7008 TCGAAGAATTGCTGGTTTCTCAGCCCGATGCCGGCGAGCAGGCCCTGGAGATCGCTGACA 7067 Query 66364 TCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGC 66423 || || || |||| | | | | | ||||| || || |||||||| |||||| Sbjct 7068 CTCTGGTGCGCTCCGGCGCGGTCGACGTTCTGGTCGTCGATTCGGTGGCGGCTTTGGTGC 7127 Query 66424 CGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCA 66483 || | |||||||| ||||| ||||| || || | | ||| ||||| |||||||| | Sbjct 7128 CGAGGGCCGAGCTGGAAGGTGACATGGGCGATTCGCTCCCCGGGCTGCAAGCGCGCCTGA 7187 Query 66484 TGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCT 66543 || |||||| |||||||| | ||| || | ||||||| | | || ||| ||| Sbjct 7188 TGAGCCAGGCCCTGCGCAAGTTGACCAGCTCGATCTCCAAATCTCAGACTCTGGTAGTCT 7247 Query 66544 GGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGC---CCGAACGAGACCA 66600 |||||||| | || ||||||||| ||| | |||| ||| ||||||| Sbjct 7248 TCATCAACCAGATCCGTATGAAGATCGG---TGTGATGTTCGGCAATCCG---GAGACCA 7301 Query 66601 CCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCG 66660 | || ||||| | || ||| ||| || |||| || ||| | ||| |||| ||||||| Sbjct 7302 CGACCGGCGGTCATGCGCTGAAGTTTTATTCCTCGGTGCGCCTCGATATCCGGCGCATCG 7361 Query 66661 CCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGA 66720 | ||||| || || |||||||||| |||||||| ||||| || || | Sbjct 7362 GTGCGATTAAGGACAAGGACCTGGTGGTCGGCAACCAGACCCGGGTCAAGGTGGTGAAAA 7421 Query 66721 ACAAGCTGGCCCCGCCGCACCGCAATGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCT 66780 ||||| |||| |||||| ||| | |||||| | || || || ||||| |||| Sbjct 7422 ACAAGATGGCGCCGCCGTTCCGGGTCGTGGAGTTCGACATCACCTATGGTGAGGGAATCT 7481 Query 66781 -CGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAG---GGCCTGGTGAAGAAGTCG 66836 | | |||| || || ||||| || | | ||| ||| || | ||| | ||| | Sbjct 7482 CCAAGACAGGT-GAGCTTCTCGATCTTG--GGGTC-CAGGCCGGTATCGTGGATAAGGCC 7537 Query 66837 GGCGCCTGGTTC 66848 |||||||||||| Sbjct 7538 GGCGCCTGGTTC 7549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240529215477000