Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq9473 147 5e-30 seq37644 118 2e-21 seq57105 111 4e-19 seq8271 98.7 2e-15 seq126573 91.5 3e-13 seq56386 91.5 3e-13 seq48996 84.2 5e-11 seq981 84.2 5e-11 >seq9473 Length=1265 Score = 147 bits (162), Expect = 5e-30 Identities = 129/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || || || |||||||| || |||||||| || || || || || || |||| || ||| Sbjct 1255 CCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGGGGAATCCCCTCC 1196 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||||||||||||| || ||||| ||||| | ||||||| || || ||||||||| Sbjct 1195 TTGTCCTGGATCTTTGCCTTGACGTTCTCGATAGAGTCAGAGGGCTCCACATCGAGAGTG 1136 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||||||||| ||||||||||| || || | ||||||||| Sbjct 1135 ATCGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCATTTT 1095 >seq37644 Length=6317 Score = 118 bits (130), Expect = 2e-21 Identities = 173/245 (71%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||| | || || | | | || ||||| || || | || || || || | || Sbjct 4556 TCCACGAAGCCGAAGAACCAAGCGGAGGGTGGATTCCTTCTCAATATTGTAGTCGGAGAG 4497 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||||| || || |||||||||||||||||||| | || || ||||| || Sbjct 4496 AGTTCGCCCATCCTCAAGTTGCTTGCCTGCGAAGATAAGTCTCTGCTGATCAGGCGGGGT 4437 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||||| ||||| || || |||| |||||| ||| || | ||| || |||||| || Sbjct 4436 CCCTTCTTTGTCTTGAATTTTTTCTTTCACCGCTTCAATTGAGTCGGAAGGTTCAACATC 4377 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATGGTTACTTGA 211129 | ||||| |||||| || || ||||| ||||| | | ||||||| | | ||| || | Sbjct 4376 TAAAGTGACCGTCTTCCCGGTCAGAGTTTTTACGTAAATCTGCATTCTCTTGTTGATTAA 4317 Query 211130 TGCTT 211134 | ||| Sbjct 4316 TTCTT 4312 >seq57105 Length=498 Score = 111 bits (122), Expect = 4e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| || || ||||| |||| ||| ||||||||||| ||||| |||||||| || Sbjct 497 AGGCGCTGCTGATCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTCTCA 438 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106 |||| |||||| || || || |||||||| ||||| || || |||||||| || || Sbjct 437 ATGGAGTCAGAAGGCTCCACATCAAGAGTGATAGTCTTCCCGGTCAGAGTCTTGACGAAA 378 Query 211107 ACCTGCATTTTATGGTTACTT 211127 | ||||||||| |||| ||| Sbjct 377 ATCTGCATTTTGAGGTTTCTT 357 >seq8271 Length=1924 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||| || || ||||| || ||||||||||| || |||||| Sbjct 1242 TTCTGGATGTTGTAGTCAGAAAGAGTTCTCCCATCCTCGAGCTGCTTGCCCGCAAAGATA 1301 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||||| || || || || || | ||| ||||||||||||||||| Sbjct 1302 AGGCGCTGCTGATCGGGGGGGATTCCCTCCTTGTCCTGGATCTT 1345 >seq126573 Length=7157 Score = 91.5 bits (100), Expect = 3e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 210942 TCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCA 211001 || || ||||| | || || || |||||| ||| || |||||| ||||| || || ||| Sbjct 3709 TCGGCGAGGGTACGCCCGTCCTCGAGCTGCCTGCTTGAGAAGATCAGGCGCTGCTGATCA 3650 Query 211002 GGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT 211061 ||||| | ||| | ||||| ||| || | |||| |||||| |||| ||| || Sbjct 3649 GGAGGGATTCCGTGCTTGTACTGAATTTGCGCCTTCAGGTTTTCTATGGAGTCGGAAGGC 3590 Query 211062 TCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||| || || || ||||| || | | |||||||||||| || | ||| Sbjct 3589 TGCACCTCAAGGGTAATGGTCTTGCCAGACAAAGTCTTTACAAAGACATCCAT 3537 >seq56386 Length=466 Score = 91.5 bits (100), Expect = 3e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || |||||||| || || |||||||| || || | || || || ||||| Sbjct 354 AGCACCAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGCGTTCTCCCATCC 413 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 || |||||||||||||| ||||| ||||| || || ||||| |||| ||| || Sbjct 414 TCAAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGATCAGGGGGAATTCCCTC 466 >seq48996 Length=1832 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || |||||||| | || ||||| ||||| | ||| | | || || |||| Sbjct 599 TGGAGGGTGGACTCCGTCTGAATGTTGTAATCATCCAGGTACATAATGTCCTCAAGCTTT 540 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || ||||| || | || || ||||| |||| ||| ||||||||||| ||| Sbjct 539 TTCCCAGCAAAGATCAGTCTCTGCTGATCAGGGGGAATTCCCTCCTTGTCCTGAATCAAA 480 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 | ||| || | | ||||| || | ||| || | || |||||||||||||| || Sbjct 479 TTTTTGACATGTGGGATGGAATCGTCGGGTTCCACTTGCAGGGTGATCGTCTTTCCTGTC 420 Query 211092 AGAGTCTTTACAAA 211105 | |||||| ||||| Sbjct 419 AAAGTCTTGACAAA 406 >seq981 Length=20169 Score = 84.2 bits (92), Expect = 5e-11 Identities = 115/157 (73%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG-TCAGGAGGAACTCCTTC 211015 ||||| || |||| || || | |||| || || || ||| | || ||| | ||| Sbjct 3790 CCATCGTCAAGCTCTTTTCCAGAAAAGACCAGACGCTGCTGGCTTGGGGGGATCCCCT-- 3847 Query 211016 CTTGTCCTGGATCTTTTG-TTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAG 211074 ||| | || || |||||| ||||||||| ||||| ||| ||| || |||||||||| Sbjct 3848 CTTTTTCTTGAACTTTTGCTTTCACGTTCTCGATCGTGAAGGAGGGCTCGACCTCGAGAG 3907 Query 211075 TGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTG 211111 |||||||||||| ||||| ||||| || || | ||| Sbjct 3908 AGATCGTCTTTCCAGTGAGGGTCTTCACGAAGATCTG 3944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156973413661850